New user of Artemis, so I hope I'm not missing something obvious. I've been given .gff files to use as Entries for a set of chromosome sequences, but I find that the supplier has been very inconsistent in how they qualify tags of features, e.g. sometimes the accession # or product name is put in one tag (usually either 'Name' or 'ID'), sometimes in the other. As a result when I show 'gene name' the results are all over the map, as are the labels under the graphics.
The current documentation says that "The "gene name" is actually the /label qualifier of the feature. If there is no /label then the /gene qualifier is used. If neither of the qualifiers exists then the key is used." As it happens my .gffs use neither of these qualifiers as tags or qualifiers (I'm guessing Artemis is geared more towards Genbank/EMBL feature tables than gffs). Is there a way to set Artemis to look for a gene name in a different way? Or or a method in Artemis to bulk-transfer/bulk edit qualifiers? -- Dr. Steven Sullivan Center for Genomics & Systems Biology New York University 12 Waverly Place New York, NY 10003 _______________________________________________ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users
