Hi I would like to be able to serve up genomes with BAM files as shown in http://www.sanger.ac.uk/resources/software/artemis/ngs/. It is very handy for our end-users to be able to visualize the a NGS alignments in a familiar tool.
Is there a how to set up artemis with Webstart and bam files loaded per genome- how do you get from my genome file and the correspond .bam and .bai to the jlnp file that is needed by the web start. - its probably obvious but I am new to web-start and would appreciate any help. The server is running Ubuntu with Apache as the web server. It is set up with the right mime types for Java Webstart. Thank you Preethi Best Regards Preethi Ramaiya
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