This is driving me crazy, and maybe someone has seen it. I have tried
everything. I have a new ubuntu 14 machine and I built everthing with
no errors, and avogadro runs fine on the console and ssh -X , but when
I try to run it under vnc it always crashes the X server. I have tried
every xserver I could find and every version of xstartup I could find.
The whole vnc client crashes when I try just avogadro.
After a crash the vnc log file shows:
Thu Apr 16 23:46:04 2015
Connections: accepted: 0.0.0.0::51330
SConnection: Client needs protocol version 3.8
SConnection: Client requests security type VncAuth(2)
VNCSConnST: Server default pixel format depth 16 (16bpp) little-endian rgb565
VNCSConnST: Client pixel format depth 16 (16bpp) little-endian rgb565
XIO: fatal IO error 11 (Resource temporarily unavailable) on X server ":16"
after 172 requests (172 known processed) with 0 events remaining.
If I run avogadro -h under vnc I see (and it does not crash the server):
avogadro -h
Xlib: extension "XInputExtension" missing on display ":16".
"Avogadro version: 1.1.1 Git: 5e4d1f7
LibAvogadro version: 1.1.1 Git: 5e4d1f7"
Locale: "en_GB"
Translation successfully loaded.
Usage: avogadro [options] [files]
Avogadro - Advanced Molecular Editor (version 1.1.1)
Options:
-h, --help Show help options (this)
-v, --version Show version information
So there are too symptoms--the XIO crash and the
Xlib: extension "XInputExtension" missing on display ":16".
Neither of these happen on the console or a regular sh -X session.
I really need to get this working under vnc, so if anyone has any
ideas or experience with this I would greatly appreciate it!
Thank you!
Sincerely,
Ron
---
Ronald Cohen
Geophysical Laboratory
Carnegie Institution
5251 Broad Branch Rd., N.W.
Washington, D.C. 20015
rco...@carnegiescience.edu
office: 202-478-8937
skype: ronaldcohen
https://twitter.com/recohen3
https://www.linkedin.com/profile/view?id=163327727
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