On 2011-05-20 09:04, Irina 264 wrote: > Hi Nicklas, > > Thanks for the quick reply. > > I run RMAExpress with Affy data, then I done filtering with equal size > of arrays afterwards. > > Then I run MergeBioAssay (with Base1pluginExecuter) to find average > between replicates (grouping assays by control and treatment with method > ‘arithmetic mean of intensity) and have this error message: “Error: Raw > data for raw data type: Affymetrix is not stored in the database.” > > When I use Agilent data, i have no problems. > > Did I explain better?
Yes... but I still have no idea why the error about raw data is coming up... As far as I know the Merge BioAssay plug-in doesn't use raw data for the calculations. It would be useful to get a complete stacktrace of the error in order to locate the source of the problem. Do you get the error while you are configuring the job? If so you should be able to display more error information by clicking on the little [+] icon in the configuration wizard. Or, if you get the error while the plug-in is running, there is a "Stack trace" tab in the job dialog. /Nicklas ------------------------------------------------------------------------------ What Every C/C++ and Fortran developer Should Know! Read this article and learn how Intel has extended the reach of its next-generation tools to help Windows* and Linux* C/C++ and Fortran developers boost performance applications - including clusters. http://p.sf.net/sfu/intel-dev2devmay _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to basedb-users-requ...@lists.sourceforge.net
