Re: [COOT] Nucleic acids residue names

[Miguel Ortiz Lombardia]

Le 14 janv. 2010 à 17:39, Paul Emsley a écrit :

> Miguel Ortiz Lombardia wrote:
>> Dear all,
>> 
>> Is there a way to ask Coot to write pdb coordinate files with nucleic acid 
>> residue names in 'standard' PDB format? That is: DA, DC, DG, DT, A, C, G, 
>> T...
>>  
> 
> No.  It's on the list.  I will use the PDB-approved nomenclature.
> 

Right, thanks Paul.

For the time being, I'm using this sed command (for DNA):

sed -e 's/ \(.\)d \(.\)/ D\1 \2/' file.pdb > edited_file.pdb

Best,


-- Miguel

Architecture et Fonction des Macromolécules Biologiques (UMR6098)
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