I cannot update openmpi. Here’s the output immediately before and at the error:
-I/sw/include /sw/bin/flag-sort: /usr/bin/clang -DHAVE_CONFIG_H -DOMPI_BUILDING=1 -O3 -DNDEBUG -fno-strict-aliasing -DHAVE_ROMIOCONF_H -MT adio/ad_nfs/ad_nfs_features.lo -MD -MP -MF adio/ad_nfs/.deps/ad_nfs_features.Tpo -c adio/ad_nfs/ad_nfs_features.c -fno-common -DPIC -o adio/ad_nfs/.libs/ad_nfs_features.o -I. -I./adio/include -I./../../../../../opal/include -I./../../../../../ompi/include -I./include -I./mpi-io -I./adio/include -I./include -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/ompi/mca/io/romio/romio/../../../../.. -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/ompi/mca/io/romio/romio/../../../../../opal/include -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/ompi/mca/io/romio/romio/include -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/ompi/mca/io/romio/romio/adio/include -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/ompi/mca/io/romio/romio/include -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/ompi/mca/io/romio/romio/mpi-io -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/ompi/mca/io/romio/romio/adio/include -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/opal/mca/event/libevent2021/libevent -I/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/opal/mca/event/libevent2021/libevent/include -I/sw/include libtool: error: Failed to create 'mpi-io/.libs' make[4]: *** [Makefile:3396: mpi-io/get_posn.lo] Error 1 libtool: error: Failed to create 'mpi-io/.libs' make[4]: *** [Makefile:3396: mpi-io/get_size.lo] Error 1 libtool: error: Failed to create 'mpi-io/.libs' make[4]: *** [Makefile:3396: mpi-io/iread.lo] Error 1 make[4]: Leaving directory '/sw/src/fink.build/openmpi-1.10.4-1/openmpi-1.10.4/ompi/mca/io/romio/romio' make[3]: *** [all-recursive] Error 1 make[2]: *** [all-recursive] Error 1 make[1]: *** [all-recursive] Error 1 make: *** [all-recursive] Error 1 ### execution of /tmp/fink.zJauj failed, exit code 2 ### execution of /tmp/fink.x0WgO failed, exit code 2 Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-openmpi-1.10.4-1 (Reading database ... 265512 files and directories currently installed.) Removing fink-buildlock-openmpi-1.10.4-1 ... Failed: phase compiling: openmpi-1.10.4-1 failed I’m still running El Capitan. Thank you for any assistance, Marc ------------------------------------------------------------------------------ _______________________________________________ Fink-beginners mailing list Fink-beginners@lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.apple.fink.beginners Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-beginners
