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• • Re: [gmx-users] Generation of the Distance Restraints Mark Abraham
  • Re: [gmx-users] Generation of the Distance Restraints James Starlight
  • Re: [gmx-users] Generation of the Distance Restraints Mark Abraham
  • Re: [gmx-users] Generation of the Distance Restraints James Starlight
  • Re: [gmx-users] Generation of the Distance Restraints Mark Abraham
  • Re: [gmx-users] Generation of the Distance Restraints James Starlight
  • Re: [gmx-users] Generation of the Distance Restraints Mark Abraham
  • Re: [gmx-users] Generation of the Distance Restraints Mark Abraham
  • Re: [gmx-users] Generation of the Distance Restraints James Starlight
  • Re: [gmx-users] Generation of the Distance Restraints Mark Abraham
  • [gmx-users] Re:g_energy g_enemat lloyd riggs
  • Re: [gmx-users] Generation of the Distance Restraints Mark Abraham
• [gmx-users] Gromacs 4.5.5 GPU Error TH Chew
  • Re: [gmx-users] Gromacs 4.5.5 GPU Error Szilárd Páll
• [gmx-users] Calculating the center of mass of a molecule Andrew DeYoung
  • Re: [gmx-users] Calculating the center of mass of a molecule Justin A. Lemkul
• [gmx-users] Installing g_mdmat from Gromacs analysis package Suhaila Haji Mohd Hussin
  • Re: [gmx-users] Installing g_mdmat from Gromacs analysis package Justin A. Lemkul
• [gmx-users] genbox,genconf saly jackson
  • Re: [gmx-users] genbox,genconf Justin A. Lemkul
• [gmx-users] protein-ligand tutorial problem rama david
  • Re: [gmx-users] protein-ligand tutorial problem Justin A. Lemkul
• [gmx-users] Re: Resources on simulation walls Dr. Vitaly V. Chaban
  • [gmx-users] gromacs 4.5.5 cygwin installation error message Wholly Peach
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Peter C. Lai
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Mark Abraham
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Wholly Peach
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Peter C. Lai
  • Fw: [gmx-users] gromacs 4.5.5 cygwin installation error message Wholly Peach
  • Re: Fw: [gmx-users] gromacs 4.5.5 cygwin installation error message Mark Abraham
  • [gmx-users] gromacs 4.5.5 cygwin installation error message Wholly Peach
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Mark Abraham
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Wholly Peach
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Peter C. Lai
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Peter C. Lai
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Mark Abraham
  • [gmx-users] gromacs 4.5.5 cygwin installation error message Wholly Peach
  • [gmx-users] Re:g_enemat lloyd riggs
  • [gmx-users] on the RAM capacity needed for GROMACS Wholly Peach
  • Re: [gmx-users] on the RAM capacity needed for GROMACS Mark Abraham
  • Re: [gmx-users] gromacs 4.5.5 cygwin installation error message Peter C. Lai
• [gmx-users] Charge delocalization fullerene R.Perez Garcia
  • [gmx-users] Charge delocalization fullerene R.Perez Garcia
  • Re: [gmx-users] Charge delocalization fullerene Tsjerk Wassenaar
• [gmx-users] Resources on simulation walls Andrew DeYoung
  • Re: [gmx-users] Resources on simulation walls Francesco Oteri
• [gmx-users] genconf,grompp saly jackson
  • Re: [gmx-users] genconf,grompp Justin A. Lemkul
• [gmx-users] g_spatial (gromacs 4.5 manual) Atila Petrosian
• [gmx-users] g_dist without output file Atila Petrosian
  • Re: [gmx-users] g_dist without output file lina
  • [gmx-users] g_dist without output file Atila Petrosian
  • Re: [gmx-users] g_dist without output file lina
  • [gmx-users] g_dist without output file Atila Petrosian
  • Re: [gmx-users] g_dist without output file lina
  • Re: [gmx-users] g_dist without output file lina
  • Re: [gmx-users] g_dist without output file afsaneh maleki
  • [gmx-users] g_dist without output file Atila Petrosian
  • Re: [gmx-users] g_dist without output file Mark Abraham
• [gmx-users] error message during make after gtomacs configuration Dialing Pretty
  • Re: [gmx-users] error message during make after gtomacs configuration Mark Abraham
  • Re: [gmx-users] error message during make after gtomacs configuration Dialing Pretty
  • Re: [gmx-users] error message during make after gtomacs configuration Mark Abraham
• [gmx-users] genconf, grompp saly jackson
  • Re: [gmx-users] genconf, grompp Justin A. Lemkul
  • [gmx-users] genconf, grompp saly jackson
  • [gmx-users] genconf, grompp saly jackson
  • Re: [gmx-users] genconf, grompp Mark Abraham
• [gmx-users] Charge groups for particle insertion Tina Wang
  • Re: [gmx-users] Charge groups for particle insertion João M . Damas
• [gmx-users] 'genconf' saly jackson
• [gmx-users] Dielectric constant calculation with Gromacs-3.3.1 Liang Shi
  • Re: [gmx-users] Dielectric constant calculation with Gromacs-3.3.1 David van der Spoel
  • [gmx-users] Re: Dielectric constant calculation with Gromacs-3.3.1 Liang
  • Re: [gmx-users] Re: Dielectric constant calculation with Gromacs-3.3.1 David van der Spoel
• [gmx-users] Looking for a GROMACS expert for summer'2012 intern/co-op MQ
• [gmx-users] genconf saly jackson
  • Re: [gmx-users] genconf David van der Spoel
  • Re: [gmx-users] genconf Justin A. Lemkul
  • [gmx-users] genconf saly jackson
  • Re: [gmx-users] genconf Justin A. Lemkul
• [gmx-users] not allocate memory and genconf saly jackson
• [gmx-users] Umbrella sampling multiple pull groups Sabine Reisser
  • Re: [gmx-users] Umbrella sampling multiple pull groups Sabine Reisser
• [gmx-users] Re: gmx-users Digest, Vol 95, Issue 60 Stephen Cox
  • [gmx-users] Re:g_energy lloyd riggs
  • Re: [gmx-users] Re:g_energy Oliver Stueker
  • Re: [gmx-users] Re:g_energy lloyd riggs
  • [gmx-users] Re: gmx-users Digest, Vol 95, Issue 60 Stephen Cox
• [gmx-users] Vi plugin for Gromacs files hubert santuz
  • Re: [gmx-users] Vi plugin for Gromacs files Szilárd Páll
• [gmx-users] About martini rama david
  • Re: [gmx-users] About martini francesca vitalini
  • Re: [gmx-users] About martini XAvier Periole
• [gmx-users] Reading starting velocities Ignacio Fernández Galván
• [gmx-users] Bus error Erik Marklund
• [gmx-users] GROMACS stalls for NPT simulation when using -npme and -dd flags Stephen Cox
  • [gmx-users] Gromacs installation in Cygwin Dialing Pretty
  • [gmx-users] -p topol.top input/output error Dialing Pretty
  • Re: [gmx-users] -p topol.top input/output error Mark Abraham
  • Re: [gmx-users] -p topol.top input/output error Dialing Pretty
  • Re: [gmx-users] -p topol.top input/output error Mark Abraham
  • Re: [gmx-users] -p topol.top input/output error Dialing Pretty
  • [gmx-users] uninstall gromacs Dialing Pretty
  • Re: [gmx-users] uninstall gromacs Mark Abraham
  • Re: [gmx-users] Gromacs installation in Cygwin Mark Abraham
  • Re: [gmx-users] GROMACS stalls for NPT simulation when using -npme and -dd flags Mark Abraham
  • [gmx-users] GROMACS stalls for NPT simulation when using -npme and -dd flags Stephen Cox
  • Re: [gmx-users] GROMACS stalls for NPT simulation when using -npme and -dd flags Szilárd Páll
• [gmx-users] Umbrella sampling to calculate binding energy under martini force field Du Jiangfeng (BIOCH)
• [gmx-users] GROMACS roadmap? GROMACS - OpenMM collaboration? Marco Moller
• [gmx-users] some questions about side chain dihedral angle sampling mircial
  • [gmx-users] Re: some questions about side chain dihedral angle sampling mircial
• [gmx-users] Segmentation fault rama david
  • Re: [gmx-users] Segmentation fault Mark Abraham
  • [gmx-users] Segmentation fault saly jackson
  • Re: [gmx-users] Segmentation fault Justin A. Lemkul
  • Re: [gmx-users] segmentation fault Justin A. Lemkul
• [gmx-users] Atom O5 not found in residue seq.nr. 1 while adding atom pragna lakshmi
  • [gmx-users] Re: Atom O5 not found in residue seq.nr. 1 while adding atom pragna lakshmi
  • Re: [gmx-users] Re: Atom O5 not found in residue seq.nr. 1 while adding atom Mark Abraham
  • Re: [gmx-users] Re: Atom O5 not found in residue seq.nr. 1 while adding atom pragna lakshmi
  • [gmx-users] Error Message when installing GROMACS. a a
  • Re: [gmx-users] Error Message when installing GROMACS. Mark Abraham
  • [gmx-users] Error Message in Make clean command for installation. a a
  • Re: [gmx-users] Error Message in Make clean command for installation. Mark Abraham
• [gmx-users] LINCS Fatal error rama david
  • Re: [gmx-users] LINCS Fatal error Mark Abraham
• [gmx-users] Using CHARMM27 with TIP4PEW Karl Debiec
• [gmx-users] Cluster analysis IISER_Minal
  • RE: [gmx-users] Cluster analysis Dallas Warren
  • [gmx-users] RE: Cluster analysis minal
• [gmx-users] Recommended protocol for cooling down temperature in 50 K steps Andrew DeYoung
  • Re: [gmx-users] Recommended protocol for cooling down temperature in 50 K steps Justin A. Lemkul
  • Re: [gmx-users] Recommended protocol for cooling down temperature in 50 K steps Mark Abraham
• [gmx-users] g_helix not recognizing protein backbone MPID
  • Re: [gmx-users] g_helix not recognizing protein backbone Mark Abraham
  • Re: [gmx-users] g_helix not recognizing protein backbone Justin A. Lemkul
  • [gmx-users] Re: g_helix not recognizing protein backbone MPID
  • [gmx-users] I need a tutorial for gromacs-4.0.5 Dialing Pretty
  • Re: [gmx-users] I need a tutorial for gromacs-4.0.5 Mark Abraham
  • Re: [gmx-users] I need a tutorial for gromacs-4.0.5 Dialing Pretty
  • Re: [gmx-users] I need a tutorial for gromacs-4.0.5 Mark Abraham
  • [gmx-users] Force field Dialing Pretty
  • Re: [gmx-users] Force field Justin A. Lemkul
• [gmx-users] Re: Re: hydrophobic and hydrophilic in implicit solvent bo.shuang
  • Re: [gmx-users] Re: Re: hydrophobic and hydrophilic in implicit solvent Mark Abraham
• [gmx-users] Martini dina dusti
  • Re: [gmx-users] Martini Dariush Mohammadyani
  • [gmx-users] Martini dina dusti
  • Re: [gmx-users] Martini Dariush Mohammadyani
  • Re: [gmx-users] Martini dina dusti
• [gmx-users] 'not allocate memory' saly jackson
  • [gmx-users] 'not allocate memory' saly jackson
  • Re: [gmx-users] 'not allocate memory' Justin A. Lemkul
• [gmx-users] (no subject) saly jackson
  • Re: [gmx-users] (no subject) Justin A. Lemkul
  • [gmx-users] (no subject) saly jackson
  • [gmx-users] (no subject) Anik Sen
  • Re: [gmx-users] (no subject) Justin A. Lemkul
  • [gmx-users] (no subject) Ashalatha Sreshty
  • [gmx-users] (no subject) Suhaila Haji Mohd Hussin
  • [gmx-users] (no subject) Nilesh Dhumal
  • [gmx-users] (no subject) Za Pour
  • [gmx-users] (no subject) Milinda Samaraweera
  • [gmx-users] (no subject) rama david
  • Re: [gmx-users] (no subject) Justin A. Lemkul
  • [gmx-users] (no subject) Pathumwadee Intharathep
• [gmx-users] Radial distribution function by COM Fabian Casteblanco
  • Re: [gmx-users] Radial distribution function by COM Justin A. Lemkul
• Re: [gmx-users] Umbrella Sampling - Ligand Protein Justin A. Lemkul
  • Re: [gmx-users] Umbrella Sampling - Ligand Protein Steven Neumann
  • Re: [gmx-users] Umbrella Sampling - Ligand Protein Steven Neumann
  • Re: [gmx-users] Umbrella Sampling - Ligand Protein Justin A. Lemkul
  • Re: [gmx-users] Umbrella Sampling - Ligand Protein Steven Neumann
  • Re: [gmx-users] Umbrella Sampling - Ligand Protein Justin A. Lemkul
  • Re: [gmx-users] Umbrella Sampling - Ligand Protein Steven Neumann
  • Re: [gmx-users] Umbrella Sampling - Ligand Protein Justin A. Lemkul
• [gmx-users] Umbrella Sampling - Protein Ligand Steven Neumann
• [gmx-users] g_select vs trjorder leila karami
  • [gmx-users] g_select vs trjorder leila karami
  • Re: [gmx-users] g_select vs trjorder Justin A. Lemkul
  • [gmx-users] g_select vs trjorder leila karami
  • Re: [gmx-users] g_select vs trjorder Justin A. Lemkul
  • [gmx-users] g_select vs trjorder leila karami
  • Re: [gmx-users] g_select vs trjorder Justin A. Lemkul
  • [gmx-users] g_select vs trjorder leila karami
  • [gmx-users] Read mdcrd from AMBER ---> Error Message a a
  • Re: [gmx-users] Read mdcrd from AMBER ---> Error Message francesco oteri
  • Re: [gmx-users] Read mdcrd from AMBER ---> Error Message Mark Abraham
• [gmx-users] a request regarding pdb2gmx and specbond.dat Ehud Schreiber
  • Re: [gmx-users] a request regarding pdb2gmx and specbond.dat francesco oteri
• [gmx-users] g_energy Kinetic Energy Hovakim Grabski
  • Re: [gmx-users] g_energy Kinetic Energy Justin A. Lemkul
• [gmx-users] charm to gromacs francesco oteri
  • [gmx-users] Fwd: charm to gromacs francesco oteri
• [gmx-users] Residue 'NAG' not found in residue topology database pragna lakshmi
  • Re: [gmx-users] Residue 'NAG' not found in residue topology database Mark Abraham
• [gmx-users] Periodic molecules and minimum bonded cut-off Andrew DeYoung
  • Re: [gmx-users] Periodic molecules and minimum bonded cut-off Justin A. Lemkul

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