In the script ICAFIX/hcp_fix.for_fix1.06a, it uses the modified version of melodic:
Debug "Modified version of melodic in use" Debug "melodic located at: ${HOME}/pipeline_tools/fix1.06a/melodic used" Debug "instead of melodic located at: ${FSLDIR}/bin/melodic" Debug "Beginning of melodic version log" if [ "${DEBUG}" = "TRUE" ] ; then ${HOME}/pipeline_tools/fix1.06a/melodic --version fi Debug "End of melodic version log" # "old" melodic command #$FSLDIR/bin/melodic -i $fmri -o ${fmri}.ica/filtered_func_data.ica -d -250 --nobet --report --Oall --tr=$tr # ${HOME}/pipeline_tools/fix1.06a/melodic -i $fmri -o ${fmri}.ica/filtered_func_data.ica -d -250 --nobet --report --Oall --tr=$tr ------------------------------- Or should I be using the old melodic? On Wed, Jul 19, 2017 at 5:05 PM, Glasser, Matthew <glass...@wustl.edu> wrote: > What is this in reference to? > > Peace, > > Matt. > > From: <hcp-users-boun...@humanconnectome.org> on behalf of Yeun Kim < > yeun...@gmail.com> > Date: Wednesday, July 19, 2017 at 7:04 PM > To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> > Subject: [HCP-Users] hcp_fix.for_fix1.06a > > Hi, > > I cannot find the modified version of melodic in > http://www.fmrib.ox.ac.uk/~steve/ftp/fix.tar.gz. > > Where is the modified melodic? > > Thank you, > Yeun > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users