Dear all,
A new testing version of ape (3.4-0.3) is available. It includes three
main new features:
- A new data class, "AAbin", to store amino acid sequences; there are
eleven new functions to generate and manipulate them including
translation from DNA.
- The function checkAlignment does some diagnostics on a DNA alignment.
- Some extra plotting functions built on ape's basic plotting functions
(plot.phylo, nodelabels, phydataplot, ring) for a specific task. For the
moment, there are two such functions: drawSupportOnEdges() and
plotBreakLongEdges().
Information on the new functions can be found at:
http://ape-package.ird.fr/NEWS
And instructions on how to get and install the testing version here:
http://ape-package.ird.fr/ape_installation.html#versions
A Windows version is available.
Best,
Emmanuel
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