Hi, Is there any way to use the updated root() function in ape ver 4.0 to find and set the midpoint root in a tree? I greatly appreciate the updated root() function to include the “edgelabel = TRUE” option, so that when I have bootstrapping support values listed as node labels, they get assigned to the proper edge of the tree after re-rooting.
However, using the midpoint.root() function from phytools or midpoint() from the phangorn packages alter the node labels after rooting, and the bootstrapping values get assigned to the wrong edges. Thus, I would love to use the new root() function, with “edgelabel = TRUE” option enabled, to midpoint a tree. I would appreciate any suggestions. Thanks, Todd _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/