Hi John.

I believe this used to be possible using the package phybase. Unfortunately, this package was not being maintained & was removed from CRAN - however archived package versions can still be obtained (so it may be possible to install from source).


All the best, Liam

Liam J. Revell, Associate Professor of Biology
University of Massachusetts Boston
web: http://faculty.umb.edu/liam.revell/
email: liam.rev...@umb.edu
blog: http://blog.phytools.org

On 12/18/2016 7:22 AM, john d wrote:
Dear colleagues,

I'm looking for an R package that will simulate gene trees onto a given
species tree and a value of theta. I tried TreeSim, but it would use a
provided tree as input.

I know that DendroPy does that, but I'd prefer using R.

Thanks!

Carlos

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