Hi,

This (or something like it) happens to me all the time: you need to install 
Jupyter in the new environment too.

The only reason what you are currently doing even halfway works is because you 
have Jupyter installed in the default conda environment and that is being used 
when you launch the notebook from the shell

________________________________
From: Germano Massullo <germano.massu...@gmail.com>
Sent: Thursday, June 29, 2017 3:22:04 PM
To: rdkit-discuss@lists.sourceforge.net
Subject: [Rdkit-discuss] Jupyter Could not find environment: my-rdkit-env

Hi there, I am experiencing some troubles in letting jupyter use rdkit
on Fedora 25
I installed Anaconda 4.4.0
then following [1] I runned

$ conda create -c rdkit -n my-rdkit-env rdkit
$ source activate my-rdkit-env

then

$ jupyter-notebook --ip foo_ip --port 8890

then from jupyter notebook

from rdkit import Chem
from rdkit.Chem import AllChem
from rdkit.Chem import Descriptors

but those imports return
====
CondaEnvironmentNotFoundError: Could not find environment: my-rdkit-env .
You can list all discoverable environments with `====`.
====

running
conda info --envs
I get
# conda environments:
#
my-rdkit-env          *  /home/user/.conda/envs/my-rdkit-env
root                     /opt/anaconda3


Thank you very much

[1]: http://www.rdkit.org/docs/Install.html




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