Re: [R-sig-phylo] ape chronos error

2016-12-21 Thread Emmanuel Paradis
Following Riana's query, it appeared that the tree she used had no branch lengths. chronos() now check for the presence of branch lengths and returns an explicit error message. Best, Emmanuel Le 16/12/2016 à 18:20, Emmanuel Paradis a écrit : Hi Riana, It's difficult to answer your

Re: [R-sig-phylo] ape chronos error

2016-12-16 Thread Emmanuel Paradis
Hi Riana, It's difficult to answer your question. Can you send some sample data to reproduce this error? Best, Emmanuel Le 15/12/2016 à 22:58, Riana Rishad Minocher a écrit : Hi, I’m writing with an issue using the chronos function in ape: I have a rooted supertree of 186 taxa (genetic &

[R-sig-phylo] ape chronos error

2016-12-15 Thread Riana Rishad Minocher
Hi, I’m writing with an issue using the chronos function in ape: I have a rooted supertree of 186 taxa (genetic & linguistic data), and am trying to time-calibrate with a set of divergence dates (genetic & linguistic; available for about 1/3 of nodes). I’m using chronos and calling agemin