Re: [Rdkit-discuss] interactive py3Dmol in jupyter notebook - not all py3Dmol.view() are visible

2017-03-28 Thread gosia olejniczak
thank you! best regards, gosia 2017-03-28 16:12 GMT+02:00 Greg Landrum : > Ah got it. I think this is a 3dmol.js/py3dmol question, not an RDKit > question. > I'd suggest asking on the 3dmol.js issue tracker: https://github.com/ > 3dmol/3Dmol.js/issues > > On Tue, Mar 28,

Re: [Rdkit-discuss] interactive py3Dmol in jupyter notebook - not all py3Dmol.view() are visible

2017-03-28 Thread Greg Landrum
Ah got it. I think this is a 3dmol.js/py3dmol question, not an RDKit question. I'd suggest asking on the 3dmol.js issue tracker: https://github.com/3dmol/3Dmol.js/issues On Tue, Mar 28, 2017 at 4:06 PM, gosia olejniczak < gosia.olejnic...@gmail.com> wrote: > dear Greg, > > thank you for your

Re: [Rdkit-discuss] interactive py3Dmol in jupyter notebook - not all py3Dmol.view() are visible

2017-03-28 Thread gosia olejniczak
dear Greg, thank you for your prompt response, yes, that notebook works just fine, however if i try to call py3Dmol.view() many more times, only few windows appear (and they disappear as i scroll down to run cells below), example:

Re: [Rdkit-discuss] interactive py3Dmol in jupyter notebook - not all py3Dmol.view() are visible

2017-03-28 Thread Greg Landrum
I may not have understood the question correctly: when I open that page all frames are active. On Tue, Mar 28, 2017 at 3:56 PM, gosia olejniczak < gosia.olejnic...@gmail.com> wrote: > hello, > > i'm using rdkit with py3Dmol in jupyter notebook, as in this example: >

[Rdkit-discuss] interactive py3Dmol in jupyter notebook - not all py3Dmol.view() are visible

2017-03-28 Thread gosia olejniczak
hello, i'm using rdkit with py3Dmol in jupyter notebook, as in this example: http://nbviewer.jupyter.org/github/greglandrum/rdkit_blog/bl ob/master/notebooks/Trying%20py3Dmol.ipynb is there a limit of how many py3Dmol.view() frames can be in one notebook? i'm asking because it seems that jupyter