I do not have this behavior on very recent version based on main branch:
Instance "supplier1" has been restarted
+ exec ldapsearch -Q -LLL -Y EXTERNAL -H
ldapi://%2fhome%2fprogier%2fsb%2f389%2ftst%2fci-install%2fvar%2frun%2fslapd-supplier1.socket
-b cn=config '(objectClass=nsMappingTree)'
dn: cn=dc\3Dexample\2Cdc\3Dcom,cn=mapping tree,cn=config
objectClass: top
objectClass: extensibleObject
objectClass: nsMappingTree
cn: dc=example,dc=com
cn: dc\=example\,dc\=com
nsslapd-state: backend
nsslapd-backend: userroot
nsslapd-referral: ldap://linux.home:5556/dc%3Dexample%2Cdc%3Dcom

dn: cn=dc\3Dfoo\2Cdc\3Dexample\2Cdc\3Dcom,cn=mapping tree,cn=config
objectClass: top
objectClass: extensibleObject
objectClass: nsMappingTree
cn: dc=foo,dc=example,dc=com
cn: dc\=foo\,dc\=example\,dc\=com
nsslapd-state: backend
nsslapd-backend: be2
nsslapd-parent-suffix: dc=example,dc=com

+ exec ldapsearch -Q -LLL -Y EXTERNAL -H
ldapi://%2fhome%2fprogier%2fsb%2f389%2ftst%2fci-install%2fvar%2frun%2fslapd-supplier1.socket
-b dc=example,dc=com dc=foo
dn: dc=foo,dc=example,dc=com
objectClass: top
objectClass: domain
dc: foo
description: dc=foo,dc=example,dc=com

Using the directory manager account rules out aci  issues so I am puzzled.
I wonder if it could be specific to the 389-ds-base-2.2.6-2.el8.x86_64
version
 but I am surprised because the 389ds 2.2.6 version is only a few months
old ...

A last point: have you restarted the instance after changing the orphan
flags ?

On Thu, May 4, 2023 at 3:55 PM Jason Villarroel <jvill...@fiu.edu> wrote:

> Hello Pierre,
>
>
>
> We created a new root suffix on one of our DR servers called
> dc=oestest,dc=fiu and created a sub suffix ou=testentry,ou=oestest,dc=fiu
> and still encountered same behavior.
>
>
>
> Performing the search ldapsearch -D "cn=manager" -W -b cn=config
> "(objectclass=nsMappingTree)" displayed the test entry having
> dc=oestest,dc=fiu as the parent suffix.
>
>
>
> dn: cn=dc\3Doestest\2Cdc\3Dfiu,cn=mapping tree,cn=config
>
> objectClass: top
>
> objectClass: extensibleObject
>
> objectClass: nsMappingTree
>
> cn: dc=oestest,dc=fiu
>
> cn: dc\=oestest\,dc\=fiu
>
> nsslapd-state: backend
>
> nsslapd-backend: testoestest
>
>
>
>
>
> # ou\3Dtestentry\2Cdc\3Doestest\2Cdc\3Dfiu, mapping tree, config
>
> dn: cn=ou\3Dtestentry\2Cdc\3Doestest\2Cdc\3Dfiu,cn=mapping tree,cn=config
>
> objectClass: top
>
> objectClass: extensibleObject
>
> objectClass: nsMappingTree
>
> cn: ou=testentry,dc=oestest,dc=fiu
>
> cn: ou\=testentry\,dc\=oestest\,dc\=fiu
>
> nsslapd-state: backend
>
> nsslapd-backend: testentrydb
>
> nsslapd-parent-suffix: dc=oestest,dc=fiu
>
>
>
> Using an ldap browser and using the the manager account with the base dn
> of the root suffix only displayed the root suffix and not the subsuffix.
> Similar behavior was seen when running an ldap search with the -s one
> parameter.  If the ldapsearch was performed with the -s sub parameter, then
> the OU was displayed.
>
>
>
> It seems that with this version subsuffixes on different databases are not
> displayed and only OUs from the root suffix are displayed.
>
>
>
> Please advise.
>
> Thank you.
>
>
>
> <Data snipped to compoy to the 100K limit>
>
>
>
> --
>
> --
>
> 389 Directory Server Development Team
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