Hi Anne, I tested with 2.1.6 but it doesn't work still. I now get this message:
R message (kernel LSCV/hadj): no subset converged, thus no output for that method. Vania R message (kernel LSCV/hadj): no subset converged, thus no output for that method. > From: [email protected] > Subject: AniMov Digest, Vol 59, Issue 1 > To: [email protected] > Date: Fri, 3 Sep 2010 12:00:01 +0200 > > Send AniMov mailing list submissions to > [email protected] > > To subscribe or unsubscribe via the World Wide Web, visit > http://lists.faunalia.it/cgi-bin/mailman/listinfo/animov > or, via email, send a message with subject or body 'help' to > [email protected] > > You can reach the person managing the list at > [email protected] > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of AniMov digest..." > > > Today's Topics: > > 1. Error in batch home range analysis (Vania Carolina) > 2. Re: Error in batch home range analysis (Anne Ghisla) > 3. Re: Error in batch home range analysis (Giovanni Manghi) > 4. Re: new plugins are coming (Giovanni Manghi) > 5. Re: new plugins are coming (Giovanni Manghi) > 6. Re: Fwd: Re: new plugins are coming (Giovanni Manghi) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Thu, 2 Sep 2010 11:04:13 -0300 > From: Vania Carolina <[email protected]> > Subject: [AniMov] Error in batch home range analysis > To: <[email protected]> > Message-ID: <[email protected]> > Content-Type: text/plain; charset="iso-8859-1" > > > Hello, > > I'm having an issue when I try to use the Home Range Analysis plugin. > I get the same error message, already posted in this list some months ago > (http://www.mail-archive.com/[email protected]/msg00153.html) > "Error in function (x, attr, field = "ID", out = allavailable, level = 95, : > The object I'm supposed to export does not come out from HR_cruncher, but if > it has the same structure, set its class to both list and homerange." > I was trying to do home range analysis on batch mode (all kernels and NNCH) > Has someone managed how to get through this error? > Im using Ubuntu 10.04 and QGis 1.5.0 > Thanks in advance. > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > <http://lists.faunalia.it/pipermail/animov/attachments/20100902/493810ef/attachment.html> > > ------------------------------ > > Message: 2 > Date: Thu, 02 Sep 2010 18:04:00 +0200 > From: Anne Ghisla <[email protected]> > Subject: Re: [AniMov] Error in batch home range analysis > To: Animal Movement <[email protected]> > Message-ID: <[email protected]> > Content-Type: text/plain; charset="utf-8" > > On Thu, 2010-09-02 at 11:04 -0300, Vania Carolina wrote: > > Hello, > > > > I'm having an issue when I try to use the Home Range Analysis plugin. > > I get the same error message, already posted in this list some months > > ago (http://www.mail-archive.com/[email protected]/msg00153.html) > > "Error in function (x, attr, field = "ID", out = allavailable, level = > > 95, : The object I'm supposed to export does not come out from > > HR_cruncher, but if it has the same structure, set its class to both > > list and homerange." > > I was trying to do home range analysis on batch mode (all kernels and > > NNCH) > > Has someone managed how to get through this error? > > Hi Vania, all, > > it is fixed in 2.1.6, now available in QGIS plugin repository. > Let me know if it works now. > This error comes when calculation of LSCV or hadj does not converge for > any subset (e.g. animal) of the dataset. Therefore R doesn't create any > homerange, and nothing is exportable. Now the plugin is taught to show a > message box with the non-conversion information. > > cheers, > Anne > > > Im using Ubuntu 10.04 and QGis 1.5.0 > > Thanks in advance. > > _______________________________________________ > > AniMov mailing list > > [email protected] > > http://lists.faunalia.it/cgi-bin/mailman/listinfo/animov > > -- > http://wiki.osgeo.org/wiki/Anne_Ghisla > -------------- next part -------------- > A non-text attachment was scrubbed... > Name: not available > Type: application/pgp-signature > Size: 198 bytes > Desc: This is a digitally signed message part > URL: > <http://lists.faunalia.it/pipermail/animov/attachments/20100902/92c2e620/attachment-0001.pgp> > > ------------------------------ > > Message: 3 > Date: Thu, 02 Sep 2010 19:29:00 +0100 > From: Giovanni Manghi <[email protected]> > Subject: Re: [AniMov] Error in batch home range analysis > To: Animal Movement <[email protected]> > Message-ID: <1283452140.1656.256.ca...@sibirica> > Content-Type: text/plain; charset="UTF-8" > > Hi Anne, > > I was testing your update and just hit two problems (I'm under Ubuntu > 10.04, gdal 1.7 and R 2.10): > > *) when using anything else then the MCP method I always get > > R error (please consult its documentation) is: > Error in writeOGR(khr.polygons, dir, name, "ESRI Shapefile") : > GDAL Error 1: Invalid index : -1 > > > *) I noticed also that the plugin shows a duplicate list of available > layers, and then it also shows the wrong columns in the filed "group > fixes by". > > http://img833.imageshack.us/img833/2793/screenshotuz.png > > > cheers! > > -- Giovanni -- > > > > > > Hi Vania, all, > > > > it is fixed in 2.1.6, now available in QGIS plugin repository. > > Let me know if it works now. > > This error comes when calculation of LSCV or hadj does not converge for > > any subset (e.g. animal) of the dataset. Therefore R doesn't create any > > homerange, and nothing is exportable. Now the plugin is taught to show a > > message box with the non-conversion information. > > > > cheers, > > Anne > > > > > Im using Ubuntu 10.04 and QGis 1.5.0 > > > Thanks in advance. > > > _______________________________________________ > > > AniMov mailing list > > > [email protected] > > > http://lists.faunalia.it/cgi-bin/mailman/listinfo/animov > > > > _______________________________________________ > > AniMov mailing list > > [email protected] > > http://lists.faunalia.it/cgi-bin/mailman/listinfo/animov > > > > > ------------------------------ > > Message: 4 > Date: Fri, 03 Sep 2010 09:18:15 +0100 > From: Giovanni Manghi <[email protected]> > Subject: Re: [AniMov] new plugins are coming > To: Animal Movement <[email protected]> > Message-ID: <1283501895.1682.56.ca...@sibirica> > Content-Type: text/plain; charset="UTF-8" > > Hi all, > > > > I've also added a time support. > > > I have also received the request to add a feature to calculate > > *) distance between each point where bearings were taken > *) distance between each point point where bearings were taken and the > location of the animal > *) angles between bearings > > how do you feel it would be the best output format? > > A separate table joinable many-to-many to the location layer? > > Or the attribute table of the vertex layer? > > > By the way, anyone interested in contribuing with a few euros to speed > up the development of this feature request? > > > cheers > > -- Giovanni -- > > > > ------------------------------ > > Message: 5 > Date: Fri, 03 Sep 2010 09:26:00 +0100 > From: Giovanni Manghi <[email protected]> > Subject: Re: [AniMov] new plugins are coming > To: Animal Movement <[email protected]> > Message-ID: <1283502360.1682.76.ca...@sibirica> > Content-Type: text/plain; charset="UTF-8" > > Hi Borys, all > > > I've also added a time support. > > > I believe that in the triangulation plugin we would need a new column in > the location output layer, a column that identifies the specimen > (usually already available when you import x/y data in QGIS from CSV): > without this column it is not possibile to immediately feed Anne plugin > to calculate Home Ranges. > > cheers > > -- Giovanni -- > > > > ------------------------------ > > Message: 6 > Date: Fri, 03 Sep 2010 10:07:25 +0100 > From: Giovanni Manghi <[email protected]> > Subject: Re: [AniMov] Fwd: Re: new plugins are coming > To: Animal Movement <[email protected]> > Message-ID: <1283504845.1682.160.ca...@sibirica> > Content-Type: text/plain; charset="UTF-8" > > Hi, > > > I'm forwarding our correspondence with Vaclav, maybe someone could have any > > thoughts. In the situation presented on the screenshots, there was three > > bearings building a triang. Then adding the fourth bearing (the point on > > the > > nord) doesn't change the polygon geometry, but moves the location as it's > > computed as a center of gravity. For me it's the best solution, but maybe > > anyone have better ideas? > > > the math (for three or more bearings) can be pretty complicated, see for > example the paragraph "3 or more receiving stations" in White and Garrot > "Analysis of Wildlife Radio-Tracking Data". So I guess that in this > early stage of development of the plugin the centre of gravity is > acceptable. > > > > I'm not sure if this is relevant. I thought other > > software packages > > > what other sw packages (open source or not) do offer triangulation > tools? > > > > > 2) arithmetic > > mean of x and y; 3) drop the farthest point and > > recalculate the remaining ; 4) drop the point > > that changes the area greatly and recalculate; 5) > > use the median of x and y as the location; and other methods > > > they all seem cool features to be added sometimes during the next stages > of development. I believe that Borys is already keeping a sort of "to > do" list :) > > > cheers > > > -- Giovanni -- > > > > ------------------------------ > > _______________________________________________ > AniMov mailing list > [email protected] > http://lists.faunalia.it/cgi-bin/mailman/listinfo/animov > > > End of AniMov Digest, Vol 59, Issue 1 > *************************************
_______________________________________________ AniMov mailing list [email protected] http://lists.faunalia.it/cgi-bin/mailman/listinfo/animov
