First of all: I have the following links for you:

current JAXP, DOM, SAX javadoc
        http://java.sun.com/xml/jaxp/index.html

XML Signature, XML canonicalization, and respective Java APIs

        http://www.jcp.org/jsr/detail/105.jsp
        http://www.w3.org/2000/09/xmldsig#
        http://www.w3.org/Signature

My thoughts concerning XML document comparisons are     as follows:
The W3 consortium has developed a specification called XML Signature.
It deals with signing XML documents. As a prerequesite of being able to sign
a document, one must first develop a valid notion of comparing XML documents.

At first sight, your proposal seems to be quite logical. As you said, it does 
not
make sense to compare XML documents on byte level. What I want to contribute to 
your
thoughts is that comparing XML documents seems to be a non trivial thing per se.
Note, that the plan to just compare the element and attribute content is also 
an oversimplification.
For example: an element's attributes can appear in any order. Therefore, to 
compare to XML documents
logically, you first have to canonicalize them. The attributes have to be 
sorted alphanumerically etc.

The DOM API has method for canonicalization, but I suppose that they mainly 
merge text nodes a.s.o.

Therefore I would in any case recommend to first read about the w3c insights 
about document comparisons.
That might save you some headaches.

Of course, since an standard API for XML Signatures is currently in 
developement at Sun, as the
Java Specification Request 105, you could also consider to wait on this API and 
then just use
this API to compute the signatures of two XML docs you would like to compare 
and then just compare the
two signature values.

I hope this was helpful to you. 
(By the way, I am no Ant developer. So don't take my words for granted. ;) ) 

greetings
Sascha Coenen



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