Thanks Kathryn This happens when you provide a classification where the terminal taxa is not known to the backbone taxonomy. What it returns is the higher node in the tree that matches, and stating it with the “HIGHER_RANK” flag.
Periodically we rebuild the backbone using the best available checklists. If you find cases where this happens the best approach today would be to help register good checklists through which we can build the backbone. The next backbone build is likely to happen within the next 2-3 months. I hope this helps. Best wishes, Tim From: API-users <api-users-boun...@lists.gbif.org> on behalf of Kathryn Reynolds <k.reyno...@cabi.org> Date: Tuesday, 9 July 2019 at 10.59 To: "api-users@lists.gbif.org" <api-users@lists.gbif.org> Subject: [API-users] rgbif - species match with higher rank Hi All, I am using the rgbif package to match up names in a database with the accepted name on gbif (name_lookup). In the output for some instances, the data returned is for the species, and the species exists on GBIF. However, the match type is “higher rank” (see attached file for a sample). I was wondering if anyone could explain to me why this is the case? It seems to be happening most often with bacterial or parasitic species… Thanks in advance, Kathryn Reynolds Junior Data Analyst CABI Head Office Nosworthy Way Wallingford Oxfordshire OX10 8DE United Kingdom Telephone: +44 (0)1491 8293<tel:+44%201491%20829305>58 Email: K.Reynolds<mailto:k.reyno...@cabi.org>@cabi.org Visit us at www.cabi.org<http://www.cabi.org/> CABI improves people's lives worldwide by providing information and applying scientific expertise to solve problems in agriculture and the environment P Think Green - don't print this email unless you really need to ************************************************************************ The information contained in this e-mail and any files transmitted with it is confidential and is for the exclusive use of the intended recipient. If you are not the intended recipient please note that any distribution, copying or use of this communication or the information in it is prohibited. Whilst CAB International trading as CABI takes steps to prevent the transmission of viruses via e-mail, we cannot guarantee that any e-mail or attachment is free from computer viruses and you are strongly advised to undertake your own anti-virus precautions. If you have received this communication in error, please notify us by e-mail at c...@cabi.org or by telephone on +44 (0)1491 832111 and then delete the e-mail and any copies of it. CABI is an International Organization recognised by the UK Government under Statutory Instrument 1982 No. 1071... **************************************************************************
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