Ed,

Hi.

Dobule clicking does serve to select all the exons.  THis works.

Dragging picks up the whole transcript... it looks like it is going to work.

Dropping though leaves only the 5'-most exon in the anotation tier.

Not the whole transcript.

Boo hoo.

Any ideas?

Malcolm Cook

-----Original Message-----
From: Ed Lee [mailto:[EMAIL PROTECTED]
Sent: Thursday, June 05, 2008 3:43 PM
To: Cook, Malcolm
Cc: '[email protected]'
Subject: Re: [apollo] annotation of new mult-exon transcript impossible

Hi Malcolm,

If you double click on an exon in the results panel, it should select all 
exons, which then you can drag into the annotation panel.
Alternatively you can select multiple exons by holding down shift and clicking 
each exon you want to bring into the annotation panel (useful if you don't want 
all exons to become annotations).

-Ed

On Thu, 2008-06-05 at 12:30 -0500, Cook, Malcolm wrote:
> Apolloers (?),
>
> I am unable to add a joined feature into my annotation tier as a new
> transcript.
>
> I read in
> http://apollo.berkeleybop.org/current/userguide.html#MouseFunctions
>
> Left drag       If you drag a feature into the annotation tier, it
> will be added as a new transcript (if editing is enabled) Shift-Left
> drag If you shift-drag a feature onto an annotation, it will be added
> as a new exon (if editing is enabled)
>
> It appears that left-drag works like shift-left drag - both just copy
> the individual exon.
>
> I do see a "ghost image" of the entire selected transcript when I drag
> and drop, but only the 5'-most exon gets an annotation feature
>
> I am using
>         Apollo Genome Annotation and Curation Tool, version 1.9.2,
> last updated May 23 2008
>         windows xp
>
> looking at EnsJ loaded mouse data from local ensemble mysql database.
>
>
> I tried dragging the exons individually and then merging them, but the
> merge option was dim.
>
> I reported this as a bug, but, perhaps the bug is in the operator....
>
> Any help appreciated!
>
> Malcolm Cook
> Stowers Institute for Medical Research - Kansas City, Missouri
>
>
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> [email protected]
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