Date: Saturday, June 2, 2018 @ 12:58:16 Author: archange Revision: 337460
Rebuild with tests fixed + just in case for the mess with non MPI version Added: python-netcdf4-openmpi/trunk/802.patch Modified: python-netcdf4-openmpi/trunk/PKGBUILD -----------+ 802.patch | 22 ++++++++++++++++++++++ PKGBUILD | 15 ++++++++++----- 2 files changed, 32 insertions(+), 5 deletions(-) Added: 802.patch =================================================================== --- 802.patch (rev 0) +++ 802.patch 2018-06-02 12:58:16 UTC (rev 337460) @@ -0,0 +1,22 @@ +From 138600a5a7df32772db1a81fd2882886818c8076 Mon Sep 17 00:00:00 2001 +From: Jeff Whitaker <[email protected]> +Date: Thu, 24 May 2018 16:45:17 -0600 +Subject: [PATCH] fix for failing test + +--- + test/tst_cdf5.py | 2 +- + 1 file changed, 1 insertion(+), 1 deletion(-) + +diff --git a/test/tst_cdf5.py b/test/tst_cdf5.py +index 1b46c91a..175f9b53 100644 +--- a/test/tst_cdf5.py ++++ b/test/tst_cdf5.py +@@ -4,7 +4,7 @@ + from numpy.testing import assert_array_equal + + FILE_NAME = tempfile.NamedTemporaryFile(suffix='.nc', delete=False).name +-dimsize = np.iinfo(np.int64).max # max unsigned 64 bit integer ++dimsize = np.iinfo(np.int32).max*2 # only allowed in CDF5 + ndim = 100 + arrdata = np.random.randint(np.iinfo(np.uint8).min,np.iinfo(np.uint8).max,size=ndim) + Modified: PKGBUILD =================================================================== --- PKGBUILD 2018-06-02 12:57:56 UTC (rev 337459) +++ PKGBUILD 2018-06-02 12:58:16 UTC (rev 337460) @@ -5,16 +5,21 @@ pkgbase=python-${_pkg,,}-${_mpi} pkgname=("python-${_pkg,,}-${_mpi}" "python2-${_pkg,,}-${_mpi}") pkgver=1.4.0 -pkgrel=1 +pkgrel=2 pkgdesc="Python/NumPy interface to the netCDF C library (${_mpi} version)" arch=('x86_64') url="https://unidata.github.io/${_pkg,,}-python"; license=('MIT') makedepends=('cython' 'python-setuptools' 'cython2' 'python2-setuptools' 'python-numpy' 'python-cftime' 'python-mpi4py' 'python2-numpy' 'python2-cftime' 'python2-mpi4py' "netcdf-${_mpi}") -source=("https://pypi.io/packages/source/n/${_pkg}/${_pkg}-${pkgver}.tar.gz";) -sha256sums=('a6c0b46f410f101c09d60b8cc460aafec06732f0130c6cb2730717bcc605b388') +source=("https://pypi.io/packages/source/n/${_pkg}/${_pkg}-${pkgver}.tar.gz"; + '802.patch') +sha256sums=('a6c0b46f410f101c09d60b8cc460aafec06732f0130c6cb2730717bcc605b388' + '17e3442e75d75fcba5fabe387f5dc5ef1cc2e7a4de25d96a2fcec699ce628289') prepare() { + cd ${_pkg}-${pkgver} + patch -p1 -i ../802.patch + cd .. cp -a ${_pkg}-${pkgver}{,-py2} } @@ -28,10 +33,10 @@ check() { cd ${_pkg}-${pkgver}/test - PYTHONPATH="../build/lib.linux-${CARCH}-3.6" python -B ./run_all.py || warning "Tests failed" + PYTHONPATH="../build/lib.linux-${CARCH}-3.6" python -B ./run_all.py cd ../../${_pkg}-${pkgver}-py2/test - PYTHONPATH="../build/lib.linux-${CARCH}-2.7" python2 -B ./run_all.py || warning "Tests failed" + PYTHONPATH="../build/lib.linux-${CARCH}-2.7" python2 -B ./run_all.py } package_python-netcdf4-openmpi() {
