Hi Joel,
Try running the collectstatic command from your packages activated env:

python manage.py collectstatic

I think that should fix the problem.  Thanks for your patience with this
latest upgrade.

If that does indeed solve the issue, let me know.
Cheers,
Alexei


Director of Web Development - Farallon Geographics, Inc. - 971.227.3173

On Thu, Nov 19, 2015 at 10:57 PM, Joel Aldor <[email protected]> wrote:

> Hi Alexei,
>
> I did use your modified Python file to run the patch. It was able to
> update all 1281 resources on the database. (Sorry I wasn't able to print
> the GET/PUT results into an output file)
>
> However, we found that the search results don't seem to work anymore. When
> I type a query, or when I select one of the featured towns on our map, no
> results appear. Also, when you edit a resource, the defined values do not
> load anymore. They are either blank or they only appear as (). But viewing
> the map and the resource reports work fine.
>
> As far as I can remember, Elasticsearch is always running whenever we load
> resources via the forms or .arches upload. We never touched Elastchsearch
> at all. Maybe you're right with the index thing? How can we determine if
> the resources were not properly indexed?
>
> You may check our dev server where we applied the patch here:
> http://52.34.18.214/search. If you wish to investigate further, please
> let me know so I could provide you user access.
>
> Regards,
>
> Joel
>
> On Friday, November 20, 2015 at 4:49:53 AM UTC+8, Alexei Peters wrote:
>>
>> Hi Joel,
>> Looking at the error, it looks like you have a record in the database
>> that doesn't exist in the entity index.  I'm not sure how the index got
>> into that state.  It would be nice to do a little more digging.
>> Using the entityid in the error, can you find the report for that
>> resource.  It should be located at:
>> http://localhost:8000/reports/974edbec-5664-4151-9018-a23216245478
>> If the report comes up successfully, maybe you can go to the form and
>> "re-save" it (which should trigger a re-index of the resource).  The form
>> should be found at http://localhost:8000/entity/{you'll have to find out
>> the entitytypeid from the report}/
>> <http://localhost:9200/entity/HERITAGE_RESOURCE.E18/5a7bf49a-1541-433a-95c9-07e4c98dacd6>
>> 974edbec-5664-4151-9018-a23216245478
>> <http://localhost:8000/reports/974edbec-5664-4151-9018-a23216245478> (make
>> sure to login).
>>
>> If you can re-save it, you can try running the patch again.  Assuming
>> that was the only issue, then you should be set.
>>
>> If you see the issue again with a different resource, I've attached a new
>> patch file that you can run instead.  Simply place the file into the
>> location where you pip installed arches (and then under
>> management/patches).  Then run the command referencing the new patch.
>> It'll print out a list of resource ids that it can't find in the index.
>> Hopefully there aren't many.
>>
>> I'm still a little perplexed as to how your index got out of sync.  Do
>> you have any ideas of how that might have happened?  Was elasticsearch not
>> running while you were adding resources via the ui?  Did you happen to
>> delete a document from elasticsearch directly?
>>
>> Please let us know, because if there's a bug I'd like to fix it!
>>
>> Cheers,
>> Alexei
>>
>> <http://localhost:8000/reports/974edbec-5664-4151-9018-a23216245478>On
>> Thursday, November 19, 2015 at 3:39:29 AM UTC-8, Joel Aldor wrote:
>>
>>> Hello Alexei,
>>>
>>> Tried to apply the patch but it gives me this error:
>>>
>>> (ENV2)ubuntu@ip-172-31-28-36:~/Projects/phm2app$ python manage.py
>>> install_patch -s upgrade_to_v3_1_1
>>>
>>> INSTALLING PYSHP MODULE
>>> -----------------------
>>> You are using pip version 7.1.0, however version 7.1.2 is available.
>>> You should consider upgrading via the 'pip install --upgrade pip'
>>> command.
>>> Requirement already satisfied (use --upgrade to upgrade): pyshp in
>>> /home/ubuntu/Projects/ENV2/lib/python2.7/site-packages
>>>
>>> UPDATING ENTITY INDEX
>>> ---------------------
>>> GET
>>> http://localhost:9200/entity/_all/5a7bf49a-1541-433a-95c9-07e4c98dacd6
>>> [status:200 request:0.002s]
>>> No handlers could be found for logger "elasticsearch.trace"
>>> PUT
>>> http://localhost:9200/entity/HERITAGE_RESOURCE.E18/5a7bf49a-1541-433a-95c9-07e4c98dacd6
>>> [status:200 request:0.040s]
>>> GET /entity/_all/974edbec-5664-4151-9018-a23216245478 [status:404
>>> request:0.001s]
>>> Traceback (most recent call last):
>>>   File "manage.py", line 28, in <module>
>>>     execute_from_command_line(sys.argv)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/django/core/management/__init__.py",
>>> line 399, in execute_from_command_line
>>>     utility.execute()
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/django/core/management/__init__.py",
>>> line 392, in execute
>>>     self.fetch_command(subcommand).run_from_argv(self.argv)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/django/core/management/base.py",
>>> line 242, in run_from_argv
>>>     self.execute(*args, **options.__dict__)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/django/core/management/base.py",
>>> line 285, in execute
>>>     output = self.handle(*args, **options)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/arches/management/commands/install_patch.py",
>>> line 39, in handle
>>>     self.run_patch_file(options['source'])
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/arches/management/commands/install_patch.py",
>>> line 49, in run_patch_file
>>>     import_module('arches.management.patches.%s' % module_name)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/django/utils/importlib.py",
>>> line 40, in import_module
>>>     __import__(name)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/arches/management/patches/upgrade_to_v3_1_1.py",
>>> line 187, in <module>
>>>     main()
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/arches/management/patches/upgrade_to_v3_1_1.py",
>>> line 163, in main
>>>     indexed_resource = se.search(index='entity', id=resourceid)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/arches/app/search/search.py",
>>> line 85, in search
>>>     return self.es.get(**kwargs)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/elasticsearch/client/utils.py",
>>> line 69, in _wrapped
>>>     return func(*args, params=params, **kwargs)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/elasticsearch/client/__init__.py",
>>> line 319, in get
>>>     params=params)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/elasticsearch/transport.py",
>>> line 307, in perform_request
>>>     status, headers, data = connection.perform_request(method, url,
>>> params, body, ignore=ignore, timeout=timeout)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/elasticsearch/connection/http_urllib3.py",
>>> line 89, in perform_request
>>>     self._raise_error(response.status, raw_data)
>>>   File
>>> "/home/ubuntu/Projects/ENV2/local/lib/python2.7/site-packages/elasticsearch/connection/base.py",
>>> line 105, in _raise_error
>>>     raise HTTP_EXCEPTIONS.get(status_code, TransportError)(status_code,
>>> error_message, additional_info)
>>> elasticsearch.exceptions.NotFoundError: TransportError(404,
>>> u'{"_index":"entity","_type":"_all","_id":"974edbec-5664-4151-9018-a23216245478","found":false}')
>>> (ENV2)ubuntu@ip-172-31-28-36:~/Projects/phm2app$
>>>
>>> Let me know how to proceed with this. Thank you.
>>>
>>> Regards,
>>>
>>> Joel
>>>
>>> On Saturday, November 14, 2015 at 9:07:26 AM UTC+8, Alexei Peters wrote:
>>>>
>>>> Hi Everyone,
>>>> The Arches team has been busy trying to improve Arches and fix a few
>>>> bugs as well.
>>>> Below you'll find a listing of all the changes that are included in the
>>>> latest releases.
>>>>
>>>> Users are encouraged to update at their earliest convenience.
>>>> Completely re-installing Arches and Arches-HIP is the easiest way to
>>>> accomplish this.
>>>>
>>>> If you can't completely re-install Arches (because you have data in the
>>>> system that you want to preserve) then you'll need to upgrade by running
>>>> the following commands:
>>>>
>>>> pip install arches --upgrade
>>>> pip install arches-hip --upgrade
>>>>
>>>> After upgrading you'll need to apply a patch by running this command
>>>> from an activated environment (make sure Elasticsearch is running):
>>>>
>>>> (on linux) --> sudo python manage.py install_patch -s upgrade_to_v3_1_1
>>>>
>>>> (on windows) --> python manage.py install_patch -s upgrade_to_v3_1_1
>>>>
>>>>
>>>> Cheers,
>>>> The Arches Team
>>>>
>>>> Listing of changes in the latest releases:
>>>>
>>>> Arches 3.1.1
>>>>
>>>>    - Added permissions change instructions to linux setup script
>>>>    - Added related resources as csv to export
>>>>    - Added date type and multipart features to export
>>>>    - Specified the version of virtualenv to use because of issues
>>>>    running the arches-app command with more recent versions on linux.
>>>>    - Added logic to support loading resources with a hard-coded value
>>>>    type conceptid.
>>>>    - Added support for specifying a particular value_type for an
>>>>    export column whenthe entity being exported is of domain type. 
>>>> Previously
>>>>    we could only specify a primary and secondary export column - if the
>>>>    entitytypeid was not an e55.
>>>>    - Enabled the importer to accept uuid formatted legacy ids as the
>>>>    entityid for aresource
>>>>    - Add sort order to default value types.
>>>>    - Adding graph export tool
>>>>    - Adding arches json exporter and importer
>>>>    - Allow users to view related resources without being logged in
>>>>    - Make sure get_context method always returns a valid concept
>>>>    - Fix file upload during the save of a .arches file
>>>>    - Fix JSON output of a concept
>>>>    - Fix time filter to work with branch list mods
>>>>    - Fix link color in lists
>>>>    - Change authentication logic. Add anonymous user. Create read and
>>>>    edit groups. Add anonymous and admin user to respective groups. Cascade
>>>>    changes to templates.
>>>>    - Clean logic in auth method to not have duplicative logic to the
>>>>    setAnonymous user middleware
>>>>    - Add unique constraint for legacyoids in concepts.concepts table.
>>>>    Add more information to entity type has no business table error.
>>>>    - Fix html error that reverted the map zoom and position updates in
>>>>    the ui
>>>>    - Add function to populate concepts legacyoid when adding concepts
>>>>    from RDM.
>>>>    - Trigger 'delete' event AFTER removing the branch (this fixes an
>>>>    issue in the time-filter.js) where a delete wouldn't refresh the search
>>>>    - Fixed bug that kept numbers from exporting to CSV.
>>>>    - Fix a few missellings in the docs
>>>>    - Fix bug where clicking a link to edit a form entry would cause
>>>>    that entry to disappear and not be entered into the editing section of 
>>>> the
>>>>    form, depends on update of knockout library
>>>>    - Add deprecation decorator, mark user_can_edit context processor
>>>>    as deprecated
>>>>
>>>>
>>>> Hip 1.0.4
>>>>
>>>>    - Update resource graphs
>>>>    - Confirm we're using a string in a regex match expression
>>>>    - Fix time filter to work with branch list mods in arches
>>>>
>>>>        Lots of updates to the docs (thanks to Adam Cox!)
>>>>
>>>>    - Add note on running ES as daemon, fix other grammar
>>>>    - Add integrity section to reports
>>>>    - Slight change in S3 bucket info
>>>>    - New docs section on converting to .arches from MS Excel
>>>>    - Add business table name for management_recommendation.e89 node in
>>>>    heritage_resource graph.
>>>>    - Add warning about S3 file deletion problem, number some existing
>>>>    lists.
>>>>    - Remake all tables straight from graph csvs, except Activity (to
>>>>    retain the descriptions. addressing issue in forum with incorrect nodes 
>>>> in
>>>>    some tables
>>>>    - Reformat/color nodes in all gephi files, export all graphs as
>>>>    pdfs in letter/legal and A4/B4, add notes on export and record of colors
>>>>    used
>>>>
>>>> --
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