Hi. On Mon, Mar 7, 2011 at 6:04 PM, Fong <fongchunc...@gmail.com> wrote: > Hi all, > > Does anyone know what happened to the "HuEx-1_0-st- > v2,coreR3,A20071112,EP" cdf file that was previously available on the > chiptypes page (http://aroma-project.org/chipTypes/HuEx-1_0-st-v2).
Follow the links under "The following subpages contain custom CDFs that map the exon array probes to gene models" on the same page. > There appears to be a new cdf file called "HuEx-1_0-st-v2,HB20080710.acs". > Is this equivalent to the "HuEx-1_0-st- > v2,coreR3,A20071112,EP"? No. An ACS file is not a CDF file. An Aroma Cell Sequence (ACS) file contains information of the 25-mer sequence on the chip. A Chip Definition File (CDF) file contains mapping information how cells (probes) should be grouped together to measure different genomic units of interest. Hope this helps /Henrik > > Thanks, > > Fong > > -- > When reporting problems on aroma.affymetrix, make sure 1) to run the latest > version of the package, 2) to report the output of sessionInfo() and > traceback(), and 3) to post a complete code example. > > > You received this message because you are subscribed to the Google Groups > "aroma.affymetrix" group with website http://www.aroma-project.org/. > To post to this group, send email to aroma-affymetrix@googlegroups.com > To unsubscribe and other options, go to http://www.aroma-project.org/forum/ > -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/
