When loading aroma.affymetrix, then calling a function that has require(GenomicRanges) in it, that has AromaCellPositionFile $byChipType(getChipType(cdf)), I get an error because IRanges has a trim method too, and the aroma method eventually calls trim(tags).
Should this be R.oo::trim(tags) in the next release ? I have IRanges 1.10.6, aroma.affymetrix 2.1.9 and R.oo_1.8.1 in R 2.13.0. -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/
