When loading aroma.affymetrix, then calling a function that has
require(GenomicRanges) in it, that has AromaCellPositionFile
$byChipType(getChipType(cdf)), I get an error because IRanges has a
trim method too, and the aroma method eventually calls trim(tags).

Should this be R.oo::trim(tags) in the next release ?

I have IRanges 1.10.6, aroma.affymetrix 2.1.9 and R.oo_1.8.1 in R

When reporting problems on aroma.affymetrix, make sure 1) to run the latest 
version of the package, 2) to report the output of sessionInfo() and 
traceback(), and 3) to post a complete code example.

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