Hi All, I was following the online viginette http://www.aroma-project.org/howtos/exportTotalCnRatioSet to export total Copy Number Ratios, i have ran CRMAv2 without problem, but when I try to do the following i got the error in cdf, anyone has similar experience to share?
Thanks CK > cdf <- AffymetrixCdfFile$byChipType("GenomeWideSNP_6") > csR_CHI <- AffymetrixCelSet$byName("47Chinese_CEL", cdf=cdf) > tags <- "ACC,ra,-XY,BPN,-XY,AVG,A+B,FLN,-XY" > chipType <- "GenomeWideSNP_6" > ds_CHI <- AromaUnitTotalCnBinarySet$byName(csR_CHI, tags=tags, chipType=chipType) Error in cdf[] : subscript out of bounds -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to firstname.lastname@example.org To unsubscribe and other options, go to http://www.aroma-project.org/forum/ --- You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To unsubscribe from this group and stop receiving emails from it, send an email to aroma-affymetrix+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/groups/opt_out.