Hi All,
I was following the online viginette
http://www.aroma-project.org/howtos/exportTotalCnRatioSet to export total
Copy Number Ratios, i have ran CRMAv2 without problem, but when I try to do
the following i got the error in cdf, anyone has similar experience to
share?
Thanks
CK
> cdf <- AffymetrixCdfFile$byChipType("GenomeWideSNP_6")
> csR_CHI <- AffymetrixCelSet$byName("47Chinese_CEL", cdf=cdf)
> tags <- "ACC,ra,-XY,BPN,-XY,AVG,A+B,FLN,-XY"
> chipType <- "GenomeWideSNP_6"
> ds_CHI <- AromaUnitTotalCnBinarySet$byName(csR_CHI, tags=tags,
chipType=chipType)
Error in cdf[[1]] : subscript out of bounds
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