Hi, I am trying to read annotation file of CytoScanHD_Array, but somehow it could not locate it.
I followed the tutorial in the web http://aroma-project.org/setup/annotationData/. I am using NetAffx Annotation Files (I could not find CDF file) . I created folder annotationData/chipTypes/CytoScanHD_Array/NetAffx/ and put annotation file CytoScanHD_Array_annot.csv there. I ran AffymetrixNetAffxCsvFile$byChipType("CytoScanHD_Array") at parent directory of annotationData. It gave error "Error in grep(pattern, basename(files0)) : invalid 'pattern' argument" Does anyone know what was wrong ? Br, C.Y -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to firstname.lastname@example.org To unsubscribe and other options, go to http://www.aroma-project.org/forum/ --- You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To unsubscribe from this group and stop receiving emails from it, send an email to aroma-affymetrix+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.