"Angela M. Baldo" wrote:
> 
> Hi everyone,
> 
> I have a couple of questions about setting colors.
> 
> The development version of the manual
> 
>(http://www.sanger.ac.uk/Software/Artemis/current_manual/options-descriptions.html#OPTIONS-COLOUR)
> says that we can set up to 18 colors (0-17).  I have managed to set 20
> (0-19).  Is this a fluke, or is the manual wrong?
> 
> Also, I was wondering, is there a way we can define more than 20 colors,
> if we want them?  Maybe build that in to a later version?  I've been
> experimenting with shading certain results, and it comes out Very Nice.

Anja,

You can specify any possible colour using RGB attributes:

from the manual:

Each feature displayed in Artemis can be given a colour. The available
colours are set in the options file (see Chapter 4) and are assigned to
a
feature by adding a /colour qualifier (see the section called Edit
Selected Features in Chapter 3). Currently there are two ways of
specifying
feature colours. The first way uses a single number. For example red is
colour 2, so adding /colour=2 as a feature qualifier will make that
feature
red. The second way is to specify the red, green and blue components of
the colour. Each of the components can take values from 0 to 255, with
255
being the most intense. For example /colour=255 0 0 is another way to
give a feature the colour red. If no /colour qualifier is set for a
feature
a default colour is used (the default colours are also specified in the
options file). 

Julian.
-- 
Dr. Julian Parkhill                             The Sanger Institute
mailto:[EMAIL PROTECTED]                    Wellcome Trust Genome Campus
Tel: +44(0)1223 494975, Fax: +44(0)1223 494919  Hinxton
http://www.sanger.ac.uk/Projects/Microbes       Cambridge
http://www.sanger.ac.uk/Users/parkhill          CB10 1SA, UK

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