Hi All

We've been annotating partial genome contigs in artemis and now have those contigs assembled into one genome scaffold.

Is there a simple way to change all of the ORF CDS coordinates in the contigs at once to reflect the restructuring of the contigs into a larger scaffold? (in artemis directly, or maybe a perlscript exists??)

Thanks, Phil
--
 Philip Hugenholtz
 Staff Scientist
 Department of Environmental Science, Policy, and Management
 151 Hilgard Hall, University of California Berkeley
 Berkeley CA 94720-3110, USA




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