FYI
Version 6.4 of the DDBJ/EMBL/GenBank Feature Table is out:
http://www.ebi.ac.uk/embl/Documentation/FT_definitions/feature_table.html
The CTRL-E editor in Artemis will need to know the new tags:
- /experiment and /inference (replacing /evidence)
- /rpt_unit_seq and /rpt_unit_range (replacing /rpt_unit)
Also, the way Artemis stores its Blast results in /blastp etc perhaps
could be augmented with the use of /inference ?
Qualifier /inference=
Definition a structured description of non-experimental evidence that
supports
the feature identification or assignment.
Value format "TYPE[ (same species)][:EVIDENCE_BASIS]"
Value format "TYPE[ (same species)][:EVIDENCE_BASIS]"
Example /inference="similar to DNA sequence:INSD:AY411252.1"
/inference="similar to RNA sequence, mRNA:RefSeq:NM_000041.2"
/inference="similar to DNA sequence (same
species):INSD:AACN010222672.1"
/inference="profile:tRNAscan:2.1"
/inference="protein motif:InterPro:IPR001900"
/inference="ab initio prediction:Genscan:2.0"
--
Torsten Seemann <[EMAIL PROTECTED]>
Victorian Bioinformatics Consortium
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