Morgan,
You should select your region, and then chose "Edit"; "Edit
subsequence (and features)". This will create a new artemis window
with that sequence and its features only. You can then save the file
of files from this window.
If the features were originally in the same file as the sequence,
they will be in a single entry in the subsequence window. If they
were in two or more entries, they will be be that number of entries
that will need to be saved separately.
Julian.
On 19 Dec 2007, at 17:42, Morgan Langille wrote:
Hello,
I am trying to create a new embl (or genbank) file that contains a
subset of features and the corresponding subsequence from a complete
genome embl file.
I have been able to successfully export the features or the sequence,
but not together. Also, I can not concatenate the feature and sequence
files together since the coordinates would not match. Is there
anyway to
do this within Artemis?
Thanks!
--
Morgan Langille
PhD Student, Brinkman Laboratory
Department of Molecular Biology and Biochemistry
Simon Fraser University, 8888 University Dr. Burnaby, BC, Canada
V5A 1S6
Phone: 778-782-5414 Fax: 778-782-5583
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Julian Parkhill
Head of the Pathogen Sequencing Unit
and Director of Sequencing,
The Sanger Institute,
Wellcome Trust Genome Campus,
Hinxton, Cambridge, CB10 1SA, UK
Visiting Professor in Microbial Genomics,
University of Oxford
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