Hi Tim, This works like a charm. But, that makes me want more. Sorry about that.
- Is there a way we can set the default bam view option to "Coverage Plot colors" ? So that we see pile up of reads. Or via command line option? I know i'm asking for too much here........ Thanks very much, Gowtham > >> ./art -Doffset=12500 -Dbam=/path/file.bam ~/foo.embl + ~/foo.gff > > This is excellent! > > Will we be able to do the same for .userplot files soon? > > eg > % ./art -Doffset=12500 -Dbam=/path/file.bam -Dplot=foo.userplot > ~/foo.embl + ~/foo.gff > OR > % ./art -Doffset=12500 -Dbam=/path/file.bam ~/foo.embl + ~/foo.gff @ > ~/foo.userplot > > -- > --Torsten Seemann > --Victorian Bioinformatics Consortium, Dept. Microbiology, Monash > University, AUSTRALIA > -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE. _______________________________________________ Artemis-users mailing list Artemisemail@example.com http://lists.sanger.ac.uk/mailman/listinfo/artemis-users