Dear all,

I am annotating a genome that is not closed. This is not unusual. In the
beginning I added the contigs from a fasta file and each contig got the
key "fasta_record". Unfortunately that is not the official Feature Key,
which gives me troubles when I export the data in EMBL or Genbank format.
The workaround is to rename this key to "source", but then all contigs are
seen as part of a contiguous sequence.

This is not an unusual situation. Is there a key to identify stretches of
DNA as independent contigs? Or is there a way to export annotated Artemis
or EMBL/Genbank data (that have cost a lot of time to annotate) as
separated contigs without losing the annotation?

Thanks for your help,

Artemis-users mailing list

Reply via email to