Dear all, I have started using Artemis a few weeks ago. What I want to do is comparing BAM files from different samples.
As I use the graphical interface it is really nice to look at the files all at once with the settings: Show - Single Reads; View - Coverage Heat map. But I would like to know how this graph is generated and if I could actually extract the matrix somewhere which is behind the graph. I also would like to understand what exactly is happening in the graph when I change the setting Read Coverage threshold. I'm glad about any help and explanations! Thank you Nicole _______________________________________________ Artemis-users mailing list Artemisemail@example.com http://publists.sanger.ac.uk/mailman/listinfo/artemis-users