Hello, I am trying to view some vcf files in artemis. I have created the vcf.gz and vcf.gz.tbi files as instructed in the manual. However artemis doesn't show them when I load them in.
I am running windows 7 64-bit - I have tried updating to the latest java version, and re-downloading and installing the latest artemis release. I get the same log issues and problem using webstart as the local version. I can load my gbk reference genome file OK, then I look at the log window and it already says "BAM &VCF not visible". When I load the vcf.gz file, it tells me in the log windows that "vcf=1", but I can't see the trace/track in the artemis window. Clicking the Display/VCF option in the menus does nothing. It looks like artemis won't show BAM/VCF on my install at all - is this an issue with the windows implementation of artemis? I thought that this might be a gbk file issue, but I get the same problem and log messages when I load a FASTA file. Thanks, Alan This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.
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