OK,
One step further, set up my Cygwin somewhat better, and now I get this 
(this is on an xplained mini with medbg). Any ideas?
Br,
Philip
> AVaRICE version 2.13svn20160229, Mar  6 2016 00:46:22
>
> JTAG config starting.
> Found a device, serial number: ATML222205020000363▒
> initJtagBox() failed: JTAG ICE timeout exception
With -d. I get this:
> D:\Dropbox\avarice>avarice.exe -d -4 -w :4242
> AVaRICE version 2.13svn20160229, Mar  6 2016 00:46:22
>
> Found HID PID:VID 0x03eb:0x2145Probing for HID max. packet size
> Setting max. packet size to 64 from DAP_Info
> JTAG config starting.HID thread started
>
>
> command "sign-on" [0x01, 0x10]
> 0E 00 00 00 01 10 00
> Received 0x81 0x11 0x00 0x06 0x0e 0x00
> read:  0e 00 00 01 80 00
>
> Got message seqno 0 (command_sequence == 0)
> response: 01 80 00
>
> command "get info (serial number)" [0x00, 0x00]
> 0E 00 01 00 00 00 00 81
> Received 0x81 0x11 0x00 0x1a 0x0e 0x01
> read:  0e 01 00 00 81 00 41 54 4d 4c 32 32 32 32 30 35 30 32 30 30 30 
> 30 33 36 33 ff
>
> Got message seqno 1 (command_sequence == 1)
> response: 00 81 00 41 54 4D 4C 32 32 32 32 30 35 30 32 30 30 30 30 33 
> 36 33 FF
> Found a device, serial number: ATML222205020000363▒
>
> command "get parameter" [0x01, 0x02]
> 0E 00 02 00 01 02 00 00 00 05
> Received 0x81 0x11 0x00 0x0c 0x0e 0x02
> read:  0e 02 00 01 84 01 00 01 04 3b 00 00
>
> Got message seqno 2 (command_sequence == 2)
> response: 01 84 01 00 01 04 3B 00 00
> ICE hardware version: 0
> ICE firmware version: 1.04 (rel. 59)
>
> command "set parameter" [0x12, 0x01]
> 0E 00 03 00 12 01 00 00 00 01 01
> Received 0x81 0x11 0x00 0x06 0x0e 0x03
> read:  0e 03 00 12 80 00
>
> Got message seqno 3 (command_sequence == 3)
> response: 12 80 00
>
> command "set parameter" [0x12, 0x01]
> 0E 00 04 00 12 01 00 00 01 01 02
> Received 0x81 0x11 0x00 0x06 0x0e 0x04
> read:  0e 04 00 12 80 00
>
> Got message seqno 4 (command_sequence == 4)
> response: 12 80 00
>
> command "set parameter" [0x12, 0x01]
> 0E 00 05 00 12 01 00 01 00 01 05
> Received 0x81 0x11 0x00 0x06 0x0e 0x05
> read:  0e 05 00 12 80 00
>
> Got message seqno 5 (command_sequence == 5)
> response: 12 80 00
>
> command "AVR sign-on" [0x12, 0x10]
> 0E 00 06 00 12 10 00 00
> Querying for response: hid_read() failed (0)
> Querying for event: unexpected response (0x81)
> read() timed out
> initJtagBox() failed: JTAG ICE timeout exception
>
> command "sign-off" [0x01, 0x11]
> 0E 00 06 00 01 11 00
> Received 0x80 0x01 0x00 0x07 0x0e 0x06
> Querying for response: unexpected response (0x82)
> Querying for event: unexpected response (0x81)
> read() timed out
>
> -----last block repeats 7 times--------
>
> command "sign-off" [0x01, 0x11]
> 0E 00 06 00 01 11 00
> Received 0x80 0x01 0x00 0x06 0x0e 0x06
> Querying for response: unexpected response (0x82)
> Querying for event: unexpected response (0x81)
> read() timed out


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