Dear all, I wonder how Avogadro recognizes double bonds. The concrete problem is as follows: I loaded gaussian log files (results from DFT geometry opt.) of molecules with conjugated bonds into avogadro for visualization, and some of the double bonds did not show up or were misplaced leading to obscure depictions such as 3-valence C or 2-valence N. The structure is fine and corresponds to the presence of double bonds. Of course I am aware that gaussian does not 'think' in terms of bond orders, but from the total nr. of electrons and the valences, it should have been obvious where to place double bonds. Of course manual redrawing is possible.....
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