I Join an exemple file.
Another information : I have this problem on the computers in my classroom ,
but not on my personnal computer running winxp too.
I'll try tommorow with drawing a molecule and in other format.
Thanks for you interest in my request.
F. GOUT
Hi,
On Mon, Jan 16, 2012 at 4:33 AM, Gout Florent
<florent.gout@...> wrote:
I'm trying to read some pdb files, for classical molecules (adrenalin,
ethanoic acid,...).
When opening the file, I've a window with the message "opening multi-molecule
file".
And Avogadro (1.0.3) displays two molecular models on the same screen (quite
analog to a stereoscopic vision).
How can I set the software to only display one molecule, in the center of the
screen ?
Hmm, I'm not sure what could be causing this, and as far as I know,
there is no stereo rendering support in Avogadro. Someone else may
know more, but in the meantime can you send an example pdb file to the
list that shows this behavior?
Does this happen with other file formats? Or when drawing a molecule by hand?
Thanks,
Dave
REMARK 4 1ADR COMPLIES WITH FORMAT V. 2.0, 17-FEB-1998
ATOM 1 OH OHH 1 4.237 0.726 -9.396 1.00 0.00 O
ATOM 2 HH OHH 1 4.001 -0.204 -9.287 1.00 0.00 H
ATOM 3 OH OHH 1C 8.803 4.479 -8.311 1.00 0.00 O
ATOM 4 HH OHH 1C 8.810 5.401 -8.037 1.00 0.00 H
ATOM 5 OH OHH 1B 6.856 6.213 -7.374 1.00 0.00 O
ATOM 6 HH OHH 1B 6.057 6.665 -7.094 1.00 0.00 H
HETATM 7 C MOL 1 7.176 2.743 -8.522 1.00 0.00 C
HETATM 8 C1 MOL 1 7.510 4.049 -8.182 1.00 0.00 C
HETATM 9 C2 MOL 1 6.530 4.921 -7.709 1.00 0.00 C
HETATM 10 C3 MOL 1 5.215 4.485 -7.575 1.00 0.00 C
HETATM 11 C4 MOL 1 4.879 3.175 -7.913 1.00 0.00 C
HETATM 12 C5 MOL 1 5.856 2.291 -8.392 1.00 0.00 C
HETATM 13 C6 MOL 1 5.509 0.831 -8.757 1.00 0.00 C
HETATM 14 C7 MOL 1 5.513 -0.096 -7.522 1.00 0.00 C
HETATM 15 N MOL 1 5.234 -1.506 -7.910 1.00 0.00 N
HETATM 16 C8 MOL 1 5.153 -2.455 -6.775 1.00 0.00 C
HETATM 17 HC MOL 1 7.951 2.084 -8.885 1.00 0.00 H
HETATM 18 H3 MOL 1 4.450 5.155 -7.211 1.00 0.00 H
HETATM 19 H4 MOL 1 3.856 2.844 -7.809 1.00 0.00 H
HETATM 20 H6 MOL 1 6.267 0.452 -9.472 1.00 0.00 H
HETATM 21 1H7 MOL 1 4.759 0.256 -6.790 1.00 0.00 H
HETATM 22 2H7 MOL 1 6.492 -0.031 -7.006 1.00 0.00 H
HETATM 23 HN MOL 1 5.932 -1.826 -8.594 1.00 0.00 H
HETATM 24 1H8 MOL 1 4.360 -2.168 -6.057 1.00 0.00 H
HETATM 25 2H8 MOL 1 6.110 -2.516 -6.222 1.00 0.00 H
HETATM 26 3H8 MOL 1 4.915 -3.473 -7.135 1.00 0.00 H
TER
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