> Let's say I want my metallic center to be represented as a sphere and my
> coordinated ligands as wireframes?
Yes, this is possible. Take a look at the manual:
http://manual.avogadro.cc/content/5-display-types/2-coloring-part-of-a-molecule.html
> Is there a way to show coordinated bonds as dashes/dots?
No, not at the moment.
Hope that helps,
-Geoff
—
Prof. Geoffrey Hutchison
Department of Chemistry
University of Pittsburgh
tel: (412) 648-0492
email: geo...@pitt.edu
web: http://hutchison.chem.pitt.edu/
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