I am having the same problem dude. It's like only a part of the molecule is
rendered. I did not update my graphic card however I think the problem
started after upgrading debian. It happened one or two weeks ago. Also
looking forward a solution.
Cheers!
El 15/3/2016 16:10, "Blake Mertz" <blake15...@hotmail.com> escribió:
> Hello,
>
> I recently upgraded my nvidia drivers to v352.79 and Avogadro is now
> failing to render a pdb molecule when I load it. After loading, I can do a
> 45 degree rotation and part of my molecule will appear, but as soon as I
> attempt to translate it forward/backward, it completely disappears.
> Re-centering doesn't do any good either. Below is the output after running
> from the command line:
>
> "Avogadro version: 1.0.3 Git:
> LibAvogadro version: 1.0.3 Git: "
> Locale: "en_US"
> Libavogadro translations not found.
> "System has OpenGL support."
> "About to test OpenGL capabilities."
> "OpenGL capabilities found: "
> "Double Buffering."
> "Direct Rendering."
> "Antialiasing."
> Loading plugins: "/usr/bin/../lib/avogadro/1_0"
> Searching for plugins in "/usr/lib/avogadro/1_0/colors"
> Searching for plugins in "/usr/lib/avogadro/1_0/engines"
> Searching for plugins in "/usr/lib/avogadro/1_0/extensions"
> Searching for plugins in "/usr/lib/avogadro/1_0/tools"
> Searching for plugins in ""
> Loading plugins: "/home/blake/.avogadro/1_0/plugins"
> Searching for plugins in ""
> Searching for plugins in ""
> Searching for plugins in ""
> Searching for plugins in ""
> Searching for plugins in ""
> QStackedLayout::setCurrentWidget: Widget 0x281e870 not contained in stack
> Could not find python module...
> GLWidget initialisation...
> GLSL support enabled, OpenGL 2.0 support confirmed.
> GLWidget initialised...
> createObjects()
> libpng warning: Ignoring attempt to set cHRM RGB triangle with zero area
> read 1 molecules.
> setOBMol called.
> Old molecule deleted...
>
> I'm running Linux Mint Debian Edition. I can upgrade to 1.1 in the
> experimental repositories, but would like to avoid that unless it's a last
> resort. Thanks for any help you can give.
>
> Blake
>
>
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