Follow-up Comment #2, patch #7184 (project avrdude):
I discovered a bug in this patch and thought I would share. It appears that
when writing to avr flash memory, the support code for pickit2 does not
correctly compute the length of the final write sequence. As a result the
final page commit never occurs. I'm not sure in what cases this was a
problem, but it was causing my bootloader write operation to fail during
verify. The last page of flash memory was always unwritten.
Uploaded avrdude_pickit2_page_commit_fix.patch
(file #25359)
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