On 02/20/2014 09:36 AM, r...@mbl.edu wrote:

> I'm using InnoDB.

What's the iostat -dmx look like?

> I've also heard Postgres will work well in a similar situation so it seems 
> I have some options to try if I decide to give up on MySQL.

Mysql's always been a mystery to me: for searchable in-process storage
there's sqlite, for databases too big for sqlite there's postgres. I
could never understand why so many people instead choose something that
combines the downsides of both and then some.

-- 
Dimitri Maziuk
Programmer/sysadmin
BioMagResBank, UW-Madison -- http://www.bmrb.wisc.edu

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