Thanks for the quickly reply!! The configuration works!!. I dont understand why my configuration, with all columns specify, give me that error but anyway...
THANKS again Johan!! On Wed, 02 Aug 2006 12:00:51 +0200, Johan Enell wrote > Hi Pablo, > > This is the errors I found: > > Data header regexp: > You should write Block\tColumn.* (this will match any line starting > with "Block Column") or Block\tColumn\tID (this will math a line > "Block Column ID". > > Header regexp: > Should something like "?(.+)=(.*)"? so the header lines are matched. > > /Johan > > Pablo Lemos Ochandio wrote: > > Hi Everybody!! > > > > I have a problem (again!) with a .gpr file. I have configure a RAW > > data importer to parser GenePix .gpr file. The plugin configuration is: > > > > Block \Block\ > > Column \Column\ > > Data footer > > Data header Block\tColumn > > Data splitter \t > > Header ATF\t1.0 > > Ignore > > Max data columns > > MetaGridX > > MetaGridY > > Min data columns > > CV > > Background pixels > > Channel 1 background mean > > Channel 1 background median > > Channel 1 background standard deviation > > Channel 1 foreground mean > > Channel 1 foreground median > > Channel 1 foreground standard deviation > > Percent saturated pixels > > Percent pixels within 1 standard deviation > > Percent pixels within 2 standard deviations > > Channel 2 background mean > > Channel 2 background median > > Channel 2 background standard deviation > > Channel 2 foreground mean > > Channel 2 foreground median > > Channel 2 foreground standard deviation > > Percent saturated pixels > > Percent pixels within 1 standard deviation > > Percent pixels within 2 standard deviations > > Spot diameter > > Foreground pixels > > Flags > > M value > > Standard deviation of ratios > > Rgn R2 > > Rgn ratio > > Raw data type genepix > > Reporter ID \ID\ > > Row > > Remove quotes true > > X > > Y > > > > > > I minimize the file to some columns (Block, Column, ID) to try to > > debug the plugin. Base2 give me the next error advise: > > > > Error: File 'File[id=31; name=prueba9.gpr]' cannot be imported by this > > plugin. > > InvalidDataException: File 'File[id=31; name=prueba9.gpr]' cannot be > > imported by this plugin. > > > > The .gpr file that im using is: > > > > ATF 1.0 > > 31 1 > > Type=GenePix Results 3 > > DateTime=2005/02/26 13:51:20 > > Settings=1.26.10.gps > > GalFile=Impresion3gal27enero04.gal > > PixelSize=10 > > "Wavelengths=635 532" > > "ImageFiles=1.26.10_750_760 24h-4.tif 2 1.26.10_750_760 24h-4.tif > > 3" > > NormalizationMethod=None > > "NormalizationFactors=1 1" > > JpegImage=1.26.10.jpg > > StdDev=Type 1 > > RatioFormulations=W1/W2 (635/532) > > Barcode= > > BackgroundSubtraction=LocalFeature > > ImageOrigin=1640, 4240 > > JpegOrigin=1640, 4240 > > Creator=GenePix Pro 4.1.1.4 > > Scanner=GenePix 4000B [92593] > > FocusPosition=5 > > Temperature=27.79 > > LinesAveraged=2 > > Comment= > > "PMTGain=750 760" > > "ScanPower=100 100" > > "LaserPower=3.54 1.82" > > "LaserOnTime=6532 6557" > > "Filters= " > > ScanRegion=164,424,2000,5952 > > Supplier=BioRobotics > > ArrayerSoftwareName=TAS Application Suite (MicroGrid II) > > ArrayerSoftwareVersion=2.4.0.2 > > Block Column ID > > 1 1 cal2 > > 1 2 cal2 > > > > Could someone help me? Could someone send me a test .gpr file or a > > valid configuration plugin? > > > > Thanks a lot > > > > ------------------------------------------------------------------------------------------------------------------------------ > > > > Pablo Lemos Ochandio - Analista de Sistemas Fisicos > > Instituto Valenciano de Investigaciones Agrarias (IVIA) > > Crta Moncada - Naquera Km 4.5 > > 46113 - Moncada > > Valencia > > Spain > > ------------------------------------------------------------------------ > > > > ------------------------------------------------------------------------- > > Take Surveys. Earn Cash. 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