Greetings!
I'm trying to understand the genepix tiff spotfinding problem I described
earlier.
I want to interact with the spotfinder plugin with my own program but I
can't create files.
I have this:
images/
|-- 13298608_532-uncompressed.tif
`-- 13298608_635-uncompressed.tif
I want to do something like this:
public class TestImageProblem {
SpotImagesData data;
FileData red;
FileData green;
TestImageProblem() {
data = new SpotImagesData();
data.setGamma(new Float(1.8));
data.setXOffset(2000);
data.setYOffset(2400);
data.setXScale(10);
data.setYScale(10);
data.setSpotsize(24);
java.io.File redfile = new
java.io.File("images/13298608_635-uncompressed.tif");
java.io.File greenfile = new
java.io.File("images/13298608_532-uncompressed.tif");
****************
Pass the data to the spot image creator ( SpotImages.createSpotImages )
****************
}
Can you tell me how to create the appropriate file objects when the files
are here and not connected to the base datbaase?
Thanks!
Chad
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