Thanks, that was the problem. It is working now. One quirk/bug I came across is that after re-creating spot images for a bioassay, the images from the original creation still remain. Logging in and out of Base does not correct this. However, refreshing the webpage (which automatically logs you out) and then logging back in causes the new images to be displayed.
Dion Agriculture and Agri-Food Canada - Agriculture et Agroalimentaire Canada -----Original Message----- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Nicklas Nordborg Sent: Thursday, March 27, 2008 2:59 AM To: BASE ML Subject: Re: [base] spot images error Lepp, Dion wrote: > I am uing BASE 2.4.5 (build #3894; schema #40) > > Dion > > Agriculture and Agri-Food Canada - Agriculture et Agroalimentaire > Canada > > -----Original Message----- > From: [EMAIL PROTECTED] > [mailto:[EMAIL PROTECTED] On Behalf Of Nicklas > Nordborg > Sent: Wednesday, March 26, 2008 1:16 PM > To: BASE ML > Subject: Re: [base] spot images error > > > Lepp, Dion wrote: >> I'm trying to create spot images from a tiff file (single layer from >> Scanarray software) and keep receiving an error with the following > stack >> trace. The image is 5 um, and I'm using the parameters given in the >> .gpr file (xscale= 5, yscale=5, xoffset= 1155, yoffset = 1577) and a >> spot size = 32. I've tried a number of variations on these values > with >> no luck. Any ideas? It happens because there is at least one spot which has a null value in it's X coordinate. It is not possible to extract the spot images unless the data contains X and Y coordinates and those spots should of course be ignored. We'll fix this in 2.6.2. /Nicklas ------------------------------------------------------------------------ - Check out the new SourceForge.net Marketplace. It's the best place to buy or sell services for just about anything Open Source. http://ad.doubleclick.net/clk;164216239;13503038;w?http://sf.net/marketp lace _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to [EMAIL PROTECTED] ------------------------------------------------------------------------- Check out the new SourceForge.net Marketplace. It's the best place to buy or sell services for just about anything Open Source. http://ad.doubleclick.net/clk;164216239;13503038;w?http://sf.net/marketplace _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to [EMAIL PROTECTED]
