Renaud Gaujoux wrote: > Hi, > > Two things: > - I've just installed BASE 2.11 and I'm trying without success to import > CEL files in batch mode using the core plugin "Raw bioassay Importer". > Even with a single file in the text file given in the configuration it > doesn't work completly. > -> I uploaded the cdf and imported the reporters > -> I uploaded the CEL files and put them directly in the /home directory > -> I'm giving a file containing a single line and the following columns: > Name, Array Design, Platform, File: > > Name Array Design File Platform > GSM30082 Mouse430A_2 /home/GSM30082.CEL Affymetrix >
You need a column specifying the file type. Eg. Name Array Design File type File Platform GSM30082 Mouse430A_2 CEL file /home/GSM30082.CEL Affymetrix > For example is there a way > to quickly access the reporters used in an array-design? Go to the array design page, switch to the "Features" tab. /Nicklas ------------------------------------------------------------------------------ _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to basedb-users-requ...@lists.sourceforge.net
