2009/10/1 <basedb-users-requ...@lists.sourceforge.net>
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> Today's Topics:
>
> 1. Re: import affymetrix cel files from AGCC (Peter Juvan)
> 2. Re: import affymetrix cel files from AGCC (Nicklas Nordborg)
> 3. Re: Size limit of online file edit (Pawel Sztromwasser)
> 4. Re: Size limit of online file edit (Nicklas Nordborg)
> 5. Re: Size limit of online file edit (Jari H?kkinen)
> 6. Re: Size limit of online file edit (Nicklas Nordborg)
> 7. Re: Size limit of online file edit (Pawel Sztromwasser)
> 8. Re: Size limit of online file edit (Jari H?kkinen)
> 9. Re: Size limit of online file edit (Pawel Sztromwasser)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Thu, 1 Oct 2009 12:14:15 +0200
> From: "Peter Juvan" <peter.ju...@fri.uni-lj.si>
> Subject: Re: [base] import affymetrix cel files from AGCC
> To: <basedb-users@lists.sourceforge.net>
> Message-ID: <003c01ca427f$ede63f90$c9b2be...@juvan@fri.uni-lj.si>
> Content-Type: text/plain; charset="us-ascii"
>
> How to get the complete stack?
>
> I guess Affymetrix GeneChip Command Console Software (AGCC) is newer than
> the used SDK.
>
> Best, Peter
>
>
>
>
> ------------------------------
>
> Message: 2
> Date: Thu, 01 Oct 2009 12:24:19 +0200
> From: Nicklas Nordborg <nick...@thep.lu.se>
> Subject: Re: [base] import affymetrix cel files from AGCC
> To: BASE ML <basedb-users@lists.sourceforge.net>
> Message-ID: <4ac48353.80...@thep.lu.se>
> Content-Type: text/plain; charset=ISO-8859-1
>
> Peter Juvan wrote:
> > How to get the complete stack?
>
> It is usually displayed somewhere in the interface. Though I don't
> know exactly what you were doing when you got this error so I can't
> tell you were to look. It should also be in Tomcat's log file.
>
> > I guess Affymetrix GeneChip Command Console Software (AGCC) is newer than
> > the used SDK.
>
> That would explain it then. If the file format didn't exist two years ago,
> then it will not work with BASE.
>
> /Nicklas
>
>
>
> ------------------------------
>
> Message: 3
> Date: Thu, 01 Oct 2009 12:40:08 +0200
> From: Pawel Sztromwasser <pawel.sztromwas...@bccs.uib.no>
> Subject: Re: [base] Size limit of online file edit
> To: BASE ML <basedb-users@lists.sourceforge.net>
> Message-ID: <4ac48708.3070...@uib.no>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> I just tested it again (FF3.5.3). Here is how to reproduce:
> - upload a text file which is larger then 8kb
> - memorize file's size
> - edit file removing one character only
> - check the size again
>
> In my case removing one character from ~40kb file shrank the file to 24kb.
>
> Pawel
>
> Nicklas Nordborg wrote:
> > There is a hard-coded limit of 100kb. Files larger than that can't be
> > edited online. I just tried to edit a 92kb file and it worked without
> > problems. Maybe it is a browser limitation? I checked with Firefox 3.0.14
> > and IE 8. In any case, I think we may have to check on the server-side
> that
> > the expected amount of data is coming through.
> >
> > /Nicklas
> >
> > Pawel Sztromwasser wrote:
> >
> >> Hi All,
> >>
> >> First of all: a superb feature! Editing text files in BASE is extremely
> >> useful for fixing batch import sheets. It saves a lot of time spent on
> >> uploading new versions of sheets after each single fix. Great job!
> >>
> >> I discovered that it has an 8kb limitation though. One can open or paste
> >> a text that is larger then 8kb, but when saving, the file is truncated.
> >> No warning is issued. I read in the ticket
> >> http://base.thep.lu.se/ticket/1270 that the availability of editing
> >> might be limited to size and type of the file, and I am wondering if
> >> this limit can be increased? I hope there are no technical limitations
> >> that required to set the size limit in the first place.
> >> I guess 50-100kb would be a reasonable size for us. Many of our import
> >> sheets have more than 100 lines and they easily exceed 8kb.
> >>
> >> Another request would be a warning displayed when the file can't be
> >> saved/edited because of its size. It took us a while to find out what is
> >> going on with some of the files being properly saved, while others were
> >> not. What do you think about it?
> >>
> >> All the best,
> >> Pawel Sztromwasser
> >>
> >>
> ------------------------------------------------------------------------------
> >> Come build with us! The BlackBerry® Developer Conference in SF, CA
> >> is the only developer event you need to attend this year. Jumpstart your
> >> developing skills, take BlackBerry mobile applications to market and
> stay
> >> ahead of the curve. Join us from November 9-12, 2009. Register
> now!
> >> http://p.sf.net/sfu/devconf
> >> _______________________________________________
> >> The BASE general discussion mailing list
> >> basedb-users@lists.sourceforge.net
> >> unsubscribe: send a mail with subject "unsubscribe" to
> >> basedb-users-requ...@lists.sourceforge.net
> >>
> >
> >
> >
> ------------------------------------------------------------------------------
> > Come build with us! The BlackBerry® Developer Conference in SF, CA
> > is the only developer event you need to attend this year. Jumpstart your
> > developing skills, take BlackBerry mobile applications to market and stay
> > ahead of the curve. Join us from November 9-12, 2009. Register
> now!
> > http://p.sf.net/sfu/devconf
> > _______________________________________________
> > The BASE general discussion mailing list
> > basedb-users@lists.sourceforge.net
> > unsubscribe: send a mail with subject "unsubscribe" to
> > basedb-users-requ...@lists.sourceforge.net
> >
>
>
>
> ------------------------------
>
> Message: 4
> Date: Thu, 01 Oct 2009 12:54:08 +0200
> From: Nicklas Nordborg <nick...@thep.lu.se>
> Subject: Re: [base] Size limit of online file edit
> To: BASE ML <basedb-users@lists.sourceforge.net>
> Message-ID: <4ac48a50.8040...@thep.lu.se>
> Content-Type: text/plain; charset=ISO-8859-1
>
> Pawel Sztromwasser wrote:
> > I just tested it again (FF3.5.3). Here is how to reproduce:
> > - upload a text file which is larger then 8kb
> > - memorize file's size
> > - edit file removing one character only
> > - check the size again
> >
> > In my case removing one character from ~40kb file shrank the file to
> 24kb.
>
> Works fine with Firefox 3.5.3 on Windows when I test it. The test with
> Forefox 3.0 is on Linux.
>
> /Nicklas
>
>
>
>
> ------------------------------
>
> Message: 5
> Date: Thu, 01 Oct 2009 13:36:39 +0200
> From: Jari H?kkinen <j...@thep.lu.se>
> Subject: Re: [base] Size limit of online file edit
> To: BASE ML <basedb-users@lists.sourceforge.net>
> Message-ID: <4ac49447.4010...@thep.lu.se>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> I can confirm Pawels problem. I run Firefox 3.5.3 on Mac OS X 10.6.1
> (Snowleopard).
>
> My 63k file is now only 32k.
>
>
> Jari
>
>
> Nicklas Nordborg wrote:
> > Pawel Sztromwasser wrote:
> >> I just tested it again (FF3.5.3). Here is how to reproduce:
> >> - upload a text file which is larger then 8kb
> >> - memorize file's size
> >> - edit file removing one character only
> >> - check the size again
> >>
> >> In my case removing one character from ~40kb file shrank the file to
> 24kb.
> >
> > Works fine with Firefox 3.5.3 on Windows when I test it. The test with
> > Forefox 3.0 is on Linux.
> >
> > /Nicklas
> >
> >
> >
> ------------------------------------------------------------------------------
> > Come build with us! The BlackBerry® Developer Conference in SF, CA
> > is the only developer event you need to attend this year. Jumpstart your
> > developing skills, take BlackBerry mobile applications to market and stay
> > ahead of the curve. Join us from November 9-12, 2009. Register
> now!
> > http://p.sf.net/sfu/devconf
> > _______________________________________________
> > The BASE general discussion mailing list
> > basedb-users@lists.sourceforge.net
> > unsubscribe: send a mail with subject "unsubscribe" to
> > basedb-users-requ...@lists.sourceforge.net
>
>
>
> ------------------------------
>
> Message: 6
> Date: Thu, 01 Oct 2009 13:48:26 +0200
> From: Nicklas Nordborg <nick...@thep.lu.se>
> Subject: Re: [base] Size limit of online file edit
> To: BASE ML <basedb-users@lists.sourceforge.net>
> Message-ID: <4ac4970a.7070...@thep.lu.se>
> Content-Type: text/plain; charset=ISO-8859-1
>
> Jari H?kkinen wrote:
> > I can confirm Pawels problem. I run Firefox 3.5.3 on Mac OS X 10.6.1
> > (Snowleopard).
> >
> > My 63k file is now only 32k.
>
> One more question. Is the data lost when loading the file or when saving
> the file?
>
> I tried it on our old Mac (10.5.8) here. Works fine but it is running
> Firefox 3.0.1
>
> /Nicklas
>
>
>
>
> ------------------------------
>
> Message: 7
> Date: Thu, 01 Oct 2009 13:49:44 +0200
> From: Pawel Sztromwasser <pawel.sztromwas...@bccs.uib.no>
> Subject: Re: [base] Size limit of online file edit
> To: BASE ML <basedb-users@lists.sourceforge.net>
> Message-ID: <4ac49758.8070...@uib.no>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> Ok, then it is not installation specific.
> (I missed your email when sending mine)
>
> Pawel
>
> Jari H?kkinen wrote:
> > I can confirm Pawels problem. I run Firefox 3.5.3 on Mac OS X 10.6.1
> > (Snowleopard).
> >
> > My 63k file is now only 32k.
> >
> >
> > Jari
> >
> >
> > Nicklas Nordborg wrote:
> >
> >> Pawel Sztromwasser wrote:
> >>
> >>> I just tested it again (FF3.5.3). Here is how to reproduce:
> >>> - upload a text file which is larger then 8kb
> >>> - memorize file's size
> >>> - edit file removing one character only
> >>> - check the size again
> >>>
> >>> In my case removing one character from ~40kb file shrank the file to
> 24kb.
> >>>
> >> Works fine with Firefox 3.5.3 on Windows when I test it. The test with
> >> Forefox 3.0 is on Linux.
> >>
> >> /Nicklas
> >>
> >>
> >>
> ------------------------------------------------------------------------------
> >> Come build with us! The BlackBerry® Developer Conference in SF, CA
> >> is the only developer event you need to attend this year. Jumpstart your
> >> developing skills, take BlackBerry mobile applications to market and
> stay
> >> ahead of the curve. Join us from November 9-12, 2009. Register
> now!
> >> http://p.sf.net/sfu/devconf
> >> _______________________________________________
> >> The BASE general discussion mailing list
> >> basedb-users@lists.sourceforge.net
> >> unsubscribe: send a mail with subject "unsubscribe" to
> >> basedb-users-requ...@lists.sourceforge.net
> >>
> >
> >
> ------------------------------------------------------------------------------
> > Come build with us! The BlackBerry® Developer Conference in SF, CA
> > is the only developer event you need to attend this year. Jumpstart your
> > developing skills, take BlackBerry mobile applications to market and stay
> > ahead of the curve. Join us from November 9-12, 2009. Register
> now!
> > http://p.sf.net/sfu/devconf
> > _______________________________________________
> > The BASE general discussion mailing list
> > basedb-users@lists.sourceforge.net
> > unsubscribe: send a mail with subject "unsubscribe" to
> > basedb-users-requ...@lists.sourceforge.net
> >
>
>
>
> ------------------------------
>
> Message: 8
> Date: Thu, 01 Oct 2009 13:52:31 +0200
> From: Jari H?kkinen <j...@thep.lu.se>
> Subject: Re: [base] Size limit of online file edit
> To: BASE ML <basedb-users@lists.sourceforge.net>
> Message-ID: <4ac497ff.9000...@thep.lu.se>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> Jari H?kkinen wrote:
> > I can confirm Pawels problem. I run Firefox 3.5.3 on Mac OS X 10.6.1
> > (Snowleopard).
> >
> > My 63k file is now only 32k.
>
> And redoing edit saves a 16k file, redoing the edit saves a 8k file, and
> another edit will not halve the size but a 7.99k file is saved.
>
>
> Jari
>
>
>
>
>
> ------------------------------
>
> Message: 9
> Date: Thu, 01 Oct 2009 14:00:18 +0200
> From: Pawel Sztromwasser <pawel.sztromwas...@bccs.uib.no>
> Subject: Re: [base] Size limit of online file edit
> To: BASE ML <basedb-users@lists.sourceforge.net>
> Message-ID: <4ac499d2.4030...@uib.no>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> Saving the file after editing: does not matter if enlarging or shrining
> editions.
> When pasting in text that would make a file bigger than 8kb, we have
> seen the problem as well (only after clicking save button of course).
>
> Pawel
>
> Nicklas Nordborg wrote:
> > Jari H?kkinen wrote:
> >
> >> I can confirm Pawels problem. I run Firefox 3.5.3 on Mac OS X 10.6.1
> >> (Snowleopard).
> >>
> >> My 63k file is now only 32k.
> >>
> >
> > One more question. Is the data lost when loading the file or when saving
> > the file?
> >
> > I tried it on our old Mac (10.5.8) here. Works fine but it is running
> > Firefox 3.0.1
> >
> > /Nicklas
> >
> >
> >
> ------------------------------------------------------------------------------
> > Come build with us! The BlackBerry® Developer Conference in SF, CA
> > is the only developer event you need to attend this year. Jumpstart your
> > developing skills, take BlackBerry mobile applications to market and stay
> > ahead of the curve. Join us from November 9-12, 2009. Register
> now!
> > http://p.sf.net/sfu/devconf
> > _______________________________________________
> > The BASE general discussion mailing list
> > basedb-users@lists.sourceforge.net
> > unsubscribe: send a mail with subject "unsubscribe" to
> > basedb-users-requ...@lists.sourceforge.net
> >
>
>
>
> ------------------------------
>
>
> ------------------------------------------------------------------------------
> Come build with us! The BlackBerry® Developer Conference in SF, CA
> is the only developer event you need to attend this year. Jumpstart your
> developing skills, take BlackBerry mobile applications to market and stay
> ahead of the curve. Join us from November 9-12, 2009. Register now!
> http://p.sf.net/sfu/devconf
>
> ------------------------------
>
> _______________________________________________
> basedb-users mailing list
> basedb-users@lists.sourceforge.net
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>
>
> End of basedb-users Digest, Vol 42, Issue 2
> *******************************************
>
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