There is no close Blast match of UNIREF:A3NLD1 Putative uncharacterized protein with PDB
The top blast hit is attributed to composition and does not prove homology. Forget the low E-value. There is lots of Proline which is a strong attractor in sequence alignments. 1> PDB:1Y0F_A mol:protein length:1054 COLLAGEN I ALPHA 1 (NEW) Score = 135 (52.599998474121094), Expect = 1.7999999499807018E-6 Identities = 30/258, Positives = 36/258 Therefore one could try http://tardis.nibio.go.jp/fugue/ Hope this helps Christoph _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
