Check this: http://boscoh.com/protein/matchpy
This is a python program, which accepts a set of equivalent 'atoms'. I beleive this can be modified easily to accept co-ordinates of the equivalent points to be superposed, instead of reading from a pdb file best WoA --- On Tue, 5/12/09, Kalidas Yeturu <[email protected]> wrote: > From: Kalidas Yeturu <[email protected]> > Subject: [BiO BB] Program for superposition of 3D point sets > To: "General Forum at Bioinformatics.Org" <[email protected]> > Date: Tuesday, May 12, 2009, 9:22 AM > Dear All > > I would greatly appreciate if you can give a program that > optimally > superposes a pair of point sets (3D) and outputs rotation > and translation > matrices corresponding to each solution. > > I searched to my best in the web but could not find one. > > Please do NOT point to > - Protein-Protein superposition web-servers/standalone > ones > - Programs that require residues to be contiguous in order > to superpose > - Motif search programs > - IEEE/other literature on point set superposition > algorithms without > corresponding implementation > > I need preferably C/Fortran program or as a last choice a > library function > that I can call from other C programs. > > Thanking You > > -- > With Regards > Kalidas Y > http://ssl.serc.iisc.ernet.in/~kalidas > _______________________________________________ > BBB mailing list > [email protected] > http://www.bioinformatics.org/mailman/listinfo/bbb > _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
