You can use Balibase benchmark see here http://www-bio3d-igbmc.u-strasbg.fr/balibase/
Regards > For our Workshop next week we would like to ask you for your ideas about > proteins with known 3D-structure, and known disease causing mutations. > > Next week we will give a practical workshop in Bioinformatics for > postgraduate students of Molecular Medicine. > > Our plan is that each student chooses a protein. The students will > obtain all mutations and SNPs from the literature and from databases. > > The students should then visualize the mutations on a homologous > 3D-structure using the Pymol view (http://en.wikipedia.org/wiki/Pymol) > integrated in STRAP ( http://3d-alignment.eu/ ). > > In the final presentation each student should discuss the function of > his/her protein and how the mutation could affect its function in terms of > catalysis, ligand binding, 3D-structure stability ... . > > Do you have ideas for proteins that would be appropriate? > > Many thanks > > Christoph > > > > _______________________________________________ > BBB mailing list > [email protected] > http://www.bioinformatics.org/mailman/listinfo/bbb > _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
