Hello, I'm looking for a software that can merge two proteins with a shared domain (given .pdb files). With sequences it would be like this :
seq 1 : MSARIATRRRDKKARRKLQ*ELGATRLVVHRT* seq 2 : *ELGATRLVVHRT*PRHIYAPNGSEVLVQVIAA result : MSARIATRRRDKKARRKLQ*ELGATRLVVHRT*PRHIYAPNGSEVLVQVIAA These two sequences have a common sequence ELGATRLVVHRT (end of the first and beginning of the second). It's easy with sequences but I have to do it with 3D structures. I have the 3D structures of both sequences 1 and 2. Thanks, - Rafik _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
