"[email protected]" <[email protected]> writes: > I need TRANSFAC (http://www.gene-regulation.com/pub/databases.html) to > predicate TFs and their TFBSs, but confused in finding out how can I obtain > the TRANSFAC dataset.
I believe TRANSFAC is proprietary. An alternative might be Jaspar. >From http://jaspar.genereg.net/ The JASPAR CORE database contains a curated, non-redundant set of profiles, derived from published collections of experimentally defined transcription factor binding sites for eukaryotes. The prime difference to similar resources (TRANSFAC, etc) consist of the open data acess, non-redundancy and quality. -k -- If I haven't seen further, it is by standing in the footprints of giants _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
